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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27109_g2_i1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:15.80 TPM:12.12
ORF EntryO_BomoASG11629_complete:A_BomoASG_c27109_g2_i1
Sequence
(Nucleotide)
TTCCGATCTATACAACTCACTTCACTTTGATTCAGTTTCTCTCCAAATCTCGAGCTTTCG
GGAAGCTAATTGTGCGCGATAGTGGTGCGTTATGTCGGACAAATAATTTATTTATGATTT
TTGTTATTTTATTTTTTACTCTACGTAACTCACGTTAGAGAAACGTATTTTTTGGACAAG
CTCTAATTATAATATGCTAATAAAATTGAATCTAATCATTTCATTGTGAAAAATAAGGAT
AAAAGATGGCTGATCGCGGAAGTTTTTTGCGACGATTTCTATCTGCCTTGTTTTTTCTAT
TGGTGTTAGTAGAACATATCCCGTCTGCTCTGGCCGAAGATGGTCACTGCATATGGTACG
GCGTTTGTGCGAACAGCACAGAACATAAAATGATGAATTGTTTCTATGATGGACCCGCTA
AACCGATCGAAGAAAAGGCAATGAAAATAATTGAGCAATATTGTCCCGAGATAGCCAAAG
GAGGTTATTCGTGCTGCAATTACGAACAACTGAACCAGCTCAAAGTGAATATCGCCCTTG
CGGAAAATTTGCTGGGGAGATGCCCGACGTGCTTTCAGAACTTTTTGAAGCCGATCTGTG
GAATGGCCTGCGCCGTCGATCAGAGCAAATACTTGAAGCCAGTTCAAACAGAACAGTTCA
ACGGTACACATCGCAGGATATCTGAGATCGATTACTACCTGAGTAAAACTTTCATGGATG
GCATCTACAACTCATGCTCTGAGGTTAAGCTTACGTCAACAAACGAGCGATCCATAAAGG
TGATGTGCGGTCAGTGGGGAGACGCGTGCTCGGCGCAACGTTGGTTCGATAACATGGGGG
ACGCTTCCAACTATCAAGTGCCCTTCCAGATTAACTATAAGGCCACTGACGTGCCCGTCG
ATGGGTACACGCCCTACGCTCCGATAGCCGAGCCCTGCAATGTCGGAACGAAGGGCATGC
CGGGCTGCTCGTGCCTGGACTGCGAGGCGTCGTGCCCCGCGCCCCCGCCGCGCCCCCCGC
CCCCGCAGCCGTTCTCCATCGCGGGCTTCGACGGCTACGCAATCGTCATGACCATCGTAT
TCTGTATCTTCTCGACGCTGTTCCTCACGGGCGTCTTCTGTTGCAATCAAACCGAAAACC
TCGTTGAGTGCGGCCCCGAGACGAGCCCGCTGCACGAGCGCCGCGCCAGTACGTACCCGC
CCCTACTGCATACGCACGGTGTGTCTTCAGACAACAATCAAGAGATGGGAACAAACGCGT
CGGGCACGCGCTGGACCATGGAGGCCACCGATGGCGACGAGACAGACGCGACGTTCCTCG
AGAAGCTCGGTGCTGCGACGGAATCCAAAATTGAAGACTTCTTCCAGTGGTGGGGCTGCG
TCATGGCCTCCTCGCCTTGGCTGGTCCTCTTCTCTGGTTTGTGCGTTGTGGTGATCCTCG
GCTCCGGCATCACGTACATGCAGGTGACCACCGACCCCGTGGAGCTGTGGGCCTCGCCCA
CCTCGCGCTCCAGGGTCGAGAGGCAGCGGTTCGATTCCTACTTCGAACCTTTCTACAGGA
CAGAAATGTTAATAATCAGCTCGAAAGGTCTGCCCGAGATCGAACACGCGAACCTGACTT
TCGGGCCTGTGTTCAACGCCACCTTCATGCTGGACGTGTTCGACCTGCAGTCCAAGATCT
TAGAGCTCGGCAACGAGTCCGGGATCCAGAACATTTGCTACGCGCCGCTGTCGTCGCCCT
TCCGCGGCCCCGTCACCAGCAAGGACTGCGTGCTGCAGAGCGTGTGGGGCTGGTGGCAGA
ACGACAAGTCCGAGTTCTCCTACGAGGACAACGAACACCTGGACAAGATCCTGCAGTGCT
CCAGCAACCCGATCTCGGTGGACTGCCTGTCGTCGTACGGCGGGCCCGTCCTGCCCGGCG
TGGCGCTGGGCGGCTTCCTGCCGCGCGGCGACCAGCTCTCTGCCCACGCGCCCTACCACC
GCGCGCAGGCACTCATCCTCACCTTTCTCGTCAACAACAAGCAGGACAAGTCCCAGCTGA
AACAAGCACTGGAGTGGGAGAAGACGTTCATTGCGTTCATGAAGAACTACACGGAGAAGG
CGATGCCGGGCTACATGGACATCGCGTACACGTCGGAGCGCTCCATCGAGGACGAGCTGG
ACCGCGAGTCCAAGTCGGACGTGTACACCATCCTCGTGTCCTACTTCATCATGTTCGCGT
ACATCGCCATCGCGCTCGGCCGCTTCACCACCTTCTCGCGGCTGCTCATCGACAGCAAGA
TCACGCTCGGGCTCGGCGGTGTGGTTATCGTGTTGGCGTCTGTGGTGTGCTCCATGGGCA
TCTTCGGGTTCTATGGAGTGGCGGCCACGCTTATCATCGTGGAGGTCATCCCGTTCCTGG
TGCTGGCCGTCGGCGTCGACAACATCTTCATCCTGGTGCAGACCCACCAGCGCGAGCCGC
GCCGCCCCGACGAGACCGTCGAGCAACACATCGGTAGAATGCTCGGCAAGGTGGGCCCGT
CGATGTTCGTGACGTCGGTGTCGGAGTCGGTGTGCTTCTTCCTGGGGGCGCTGAGCGACA
TGCCGGCCGTGCGCGCCTTCGCGCTGTACGCCGCCGTGGCGCTGCTCGTGGACTTCCTGC
TGCAGGTCACCTGCTTCGTGGCGCTGCTGGCGCTGGACACGCGCCGACAACTCGACAACA
GGTTCGATATATTCTGCTGTCTGCGGGGCACCAAAACAGACCTGGCAGAACAAGGTGAAG
GAGCATTGTACAACCTGTTTCAACATTTCTATGTACCTTTCCTGATGAAGAGGGAAGTCA
GAGCCTCAGTCATGATTATATTCTTTGCTTGGCTCTGCTCGTCTGTTGCTGTAGCGCCTC
ACATCGACATCGGACTAGACCAAGAGCTGTCTATGCCCCACGACAGTTTCCAGTTGAAGT
ACTTCCAGCATCTGAACCGCTACCTGAACATCGGTCCGCCGGTCTACTTTGTGCTCACGG
ACGCCGAGACGGACGCCAAGCTGAACTACTCCACCCCCGACGTGCAGAACTTGCTGTGCG
GCTCGAGGTTCTGTAGACCCGACAGTCTCGCCATGCAGATATACGCTGCGTCCCGCAGCC
CGGCCGACACGTACATCGCGGCTCCAGCCAACTCTTGGCTCGACGACTTCTTCGACTGGT
CTGTCTCACCGGAGTGCTGCTTCTACTTCCAGTCCAACAACAGCTTCTGTCCCAGCGACA
CTCAACCCGACGATTGTGCCGCTTGCAACATAAAGTTGGTGCAGCCGGAAGAGCGTCCCA
GCCCGCAGGACTTCAGCACGTACCTGCCGTACTTCCTGCAGGACAACCCGTCGAGCCGCT
GCGTCAAGGGAGGCCACGCGGCCTACTCGCACGCCGTCAACCTGCGCTCGCACAGCCAGA
ACACCACCGGGATCGGCGCCACCTACTACCAGAGCTACCACACGGTCCTGCGCAGCAGCT
CGGACTACTACGGCAGCCTGCGGGCGGCGCGCGCGCTGGCGGGCTCGCTCACGGAGACGC
TCAACGCGCACCTCCGCGACCTGGGACACTCCGCCACCGTCAACGTCTTCCCCTACTCGG
TCTTCTACGTCTTCTACGAGCAGTACCTCACCATGTGGTCCGACACCCTCAAGAGCATGG
GCATCTCCGTGCTCTCCATATTCTTCGTCACCTTCGTGCTCATGGGCTTCGATCTCTTCT
CGGCTCTTGTAGTCGTAGTGACCATCACTATGATTGTTGTTAATCTCGGCGGCCTCATGT
ACTGGTGGGGCATCAGTTTGAATGCAGTCTCGCTTGTAAATTTGGTGATGGCGGTGGGCA
TATCGGTGGAGTTCTGCTCGCACCTGGTGCACTCGTTCAGCGTGTCGGCGGGGCGCGGGC
GCGGGGAGCGCGCGGCGGACGCGCTGCTGCGCATGGGCTCGTCCGTGCTGTCCGGCATCA
CGCTCACCAAGTTCGGCGGCATCATCGTGCTCGCCACGGCCAAGAGCCAGATCTTCCAGG
TGTTCTACTTCCGGATGTACCTCGGGATTGTGCTGTTCGGTGCGGCCCACGGACTCGTAT
TCCTGCCGGTTATGCTCAGCTATATCGGTTCGCCGGTTAACAAACAGAAGCTGGCCAACC
AGAGGCGGCGCGGCAACGAGACGACGGTCGCCGAAAGTTCGCTCACACGAGTAAGACACG
GCCACCCCACATATTACAGAGAGTACACGTTCGACTCGATACCCTCGTGAGCTTGCACGG
ACGATGTTTAGCTGAGACGCGCGGAGGCTGCGTAAACGTAAGCTAGGAAACTGTTTGTCT
ACTCTAAGTACTGTTTGTTATACGACATTATAATGGCAGAAAAAAATCTAGTTCACTCAG
TCTGCCCATATAAGACGATAAGTAAATACATAAAATGTTTTATATACATTTTTGGAAGAG
CAAAAAAACTTTAAGTATTAACAAATCAAGACATTACAGTAATAGTTAATTCGCATTAAT
TTCGTCACATTTAAGATCTAAGAACGTGTCTGTCCGTACGACTGCTATAACAGATTTTAG
ATACAATAGATGTTTGACGCGCGGAAAGTATTTAGTGTCACTTGCAAGCCGCCTCCGTCT
CGTTTGAGTTCGTTTACCCGGCACGACAGCTTTGTGTTACATTGCGCGCTATCCATGAAT
TAAAAAAAAAATCGAACGTCGAATGTTTTAGTGCTAGCTAACGTTTACACGGGAGTATTT
GATTGTACCCTAACAACCTAGGGAATTATATTTGCAAATAAAAATGCTCAGCTAAACATT
GTATAATACAATTTCGTCACGCAAACAACGCGTCCATGTATGCTGTACAATATTAAAACA
AGTCGCATATTAAATGTTTCAATTAGTATTTTTCTATCCGTACGTACACAGTATTATTTT
ATTCCTGAGTGTTTTATTTTTAGAGAAATGCTACTTGAAATGCTACTTACTGTTACGGCC
TTGTTTTCGTATTTTGTTTTTTAATTTATATTTCGTTAAATATTTTTGTGACTTTGAGAA
CAACGTTCAGGTCAGGATATATTTAGTTGTTATTAAATATATTATATAAAATGCTTCAAT
GTTCATTTTGTAGAAATAAACGATGGATCCGTTTTATGTACAGCTATGCACTGTAATGTT
AAAATAATATTATTTGTAAAATTAAACCATTTGAGTCTTTCTTTTCGTTTTGCTTGTAGT
AATTAATATATAATAATTTTAATATTATATTAACACCGTTTTACTTAACGAAGGTCACAA
AAATATTTATCAGGGAGAGCGGTTTTATTTTATTTTTTTACCTTTATCTTTGTATTTTGT
TAAGTTAACAACACAATATGTTATTTTATATTACACTTCCAACAAACTGGTTTCTAACCT
GTTTTATGGTACATGGTATAAAACTGCGTATTTACATTAAAGTAACAAATGTTTTTTTTT
TTCTATAATTAATATGCATGCCGTTTATTTTTTTAATGAAGAAATTTTACTATTTATTTT
CTTTTTTTTTTTGCTGTCAACTATAATAATTATAATTTATTATTGATATTTGTTGGTGAC
GTGTCGCTATCTGCTTCCGCCGTAATGTTCTTATACGTTTCAAAATAAATTATGAAATAA
TAATGTTTAAGACATTGAATATTGGTGGTTGTCTGATGCAATATCGTGGTTGGGAACTTT
TAAACAAATGATCAAATATTAATTCTGAAGTCTCAAATTTTTAATTATTTTCATTTGTAT
ATATTACAATTTAAATTATGAAATACACATTTTACATTATATAATAGTAAAATGGTAAAT
GAATTAACTAATTAAATTATTATTATTTAGAAGCTTTTGGA
(5861 bp)

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