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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27058_g1_i2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		vam6/Vps39-like_protein_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:21.03 TPM:16.13
ORF EntryO_BomoASG11547_complete:A_BomoASG_c27058_g1_i2
Sequence
(Nucleotide)
CTTATGTATTCATACATTGCTTGTCATCATTCATAAAAATATTATTTTTTGTTTCTACTT
GGTATTTACAAAAGCTTAATGTAATAAACCATAATATATCCTCCGCTTGTAGATGCACCA
AATTCACTTTTGGCAATTTTATTATGGGTATTCGAAAAAAAAAGGATCTTGATAAACACA
AAGTCATAGTTTCCTACGAAATGGGAGGATTCAGATTCGTGTAAGGTTTTCATCTAAACG
AAATTGTTTTGTTGTTTTAATTACAAAATTGTGTAAAATGCACGAAGCGTATGAAGTTTC
ACATCTGCTTAATGCCACCGTGCAGATCGAAGCAATAGCTGCATTCGAGAATAACCTATT
ATTAGGTACGAGGCAAGGCCATTTATTGATGTACTCTTTATCAACAAATAATGAAGAGCA
AAAGTATCAGGTACATTTGTTAAGATACAGGAAGAATTTTAGCAAAAAACCTATTCAGCA
AATTGAAGTTATACTGGATGAAAATCTATTATTATGTCTGACAGATTCTACACTAGCTAC
ATACAACATTAATGGTGTTAATTTTCCATTAATAAAAACTTTTGAACAGACAAAGGGTGC
TTCACTTTTTGCTTTGGATTGTAAGGTTTCATCAAGTAATGGTGCAGCGTCATCTGATGT
TCGTCTTTGCGTTGCAGTAAGGAGGAAACTTCAAGTGTACTGCGGGAGTAAGGGTGAATT
TAAACACATGCTAGATCTAAATATACCAGATGTACCAAAAGTAATGGCCTGGGGTCTGCA
GTATCTATGTGTGGGATTTAAAGCAGAGTACACCCTATATGATGTGTCAGATGGAAAACC
AAAAGAACTATTTCCCACAAGTAGTTCTAAATCATTAGAGCCAACTATTTCTAAGTACAC
AGAGACATCTTTCCTAGTAGGACGTGACCAAACATCGGTTCTTATAGAGGAGTCTAATAA
AAATGTCGATATAAAGAAAACTATTAAATGGAAGGAGGCGCCTCTTGCTGTGGTGTGGGA
TCAGCCGTTTGTACTGGGTCTATTGCAAGATCAAGTTGTTGTGCAGACTGTGGAGCCAGC
GTTTTATATACAATCATTGTCCGAATTGAATAAAGCAAGACTGATGTACAGATGCAAACG
AGGCTTAATATTCGTGGCCTCCGTCGGGCAGGTGTGGTGTCTCAGCTTAGTCGACATAAC
GAAACAAAGGCAACAGCTACTGAAAGACAAACAGTTCCAAATAGCTATAGAGTTAACTAC
GTTGTCACAATGCTCGCCCGAGGAGAAAAAACAAAAAATACATTCCATACAAGTGCTGAA
TGCACTAGAAGACTTCGACAACAAATGTTACACGCAAGCGATGCAGGAATTCGCCAAACT
AAACACCGATCCGGCCGATGTCATCAAATTGTTTCCTGAACTAGACGGCCGTACAGACGG
CGAGAAAAGTGGAAAGCTGAAAGGGAAAGATTTAGAGAACGCTCTGAACGCACTTATACC
GTATTTAGTTGAGTTGCGAAGAAAGATCGGCAAGGGCAGTCCCGAACCTAACGGGTCTCC
TCCGCAAGAGGGAACCAGCCAAAGAAACGTCGCTCAGCAGATGGAGTTGATTGATACAAC
GCTTCTGAAATGCTATTTAATGACAAACGACGCATTTGTCGCGCCCCTGTTACGCTTGAA
CAATTGTCGTTTAGAGGAGGCCGAGAAGACATTACTGCAACACGGCAAGCACAGCGAACT
GATAATATTGTACCAAACTAAAGGGCAGCACACGAAGGCGCTTCAGCTGTTGCGGGAACA
AGCCAAGCAGCCGGACTCCAGCCTCGAGGGATATCGGGGCACTAAGAACTACTTGCAACA
GTTAGGTGCCGAGCATATAAATTTAATATTCAATTTTTCCGATTGGATTCTGAAAGAGAA
CCCCGAGGAGGGCTTGAAGATATTCACGGAAGATAAAATCGAAGTCGAAAACTTACCCCG
TCCGAAAGTACTTGACTTCTTACTGAGAGAACACGAATCGCTTGTGATACCTTACCTGGA
ACACATTATACACACGTGGAACGATACGAATCCATTGTTCCACGACGCCCTAATAAACAT
GTACAGGGAGAAGATAATTAATAAAAAAGCGAATATTACCGAAGAAGAATTGCTGCATAC
GAAGTCGAAGCTGTTGGCTTTTCTAGAAAAATCGACTCACTACACGCCCGAGAGAGTGTT
GCTGCATTTCCCTACCGATGGATTGTTTGAGGAGCGCGCCGTGGTGCTGGGGAAGCTGGG
ACGACACGAAATGGCGCTCGCAATATATGTGCTGATCTTGGGGGACGTGGAAAGAGCGAT
GCGATACTGTGAAAACGTGAGTGAAAATCTCAAGGACAAGAGTCAAGACGTTTACGTTAT
CCTCATGAAGATATTGATGAATCCCGATCAGATTGCCGCCCTTAGCGGACCGCTCGCCAA
CGTACCAAGACACCCGAAAACATCGGTGCCCGATCTAGAAACGGCTCTGGATATATTGGA
AAAACACGCTGATAAGATCTCTCCCTTAAAAGCACTCGCAGTATTACCAGATTCGGTGCC
GCTTAGCCGATTGAAACACTTTCTGGAAAGCTCATTAGAGGCTCAACTCACGTTGAAACG
GAGAATGCAAATACTCAAAGGACTGTTGTATGCGGAACATATGCAGGTCCAAGAGCTGAA
GCATTACCACGAATCAAAGAGTGTTGTTATAAACGACTACGACGTGTGTCAAGTTTGCAA
GAAGCGCTTCGGTCATCAGAGCGCGTTCGTGCGTTATCCAAACGGTGACATTGTTCATTA
TTCGTGTAGAAGCGATAAATAGAATGTTACCGGCGTTTACCTAATGAATATGAAATGAAT
TTCAGAACTGCTCTTCGTTTATTGATAGACTCTTTTTTGTTTTTGTTTTTTTTTTTTTGC
GAAGTCATTCGCGATCATTCAGCCTGCCTGAGAATTATTGGCCAGCCAAACTGCTGTCTA
CCGCATAGGAAATAATTTGAAAGAAAACTCATTAGCAGAGCCAAATGCCTGATAGCTCTG
AATAGATCTGGCATTGGATGATCGCTATGGTTACCGGTGATGGTGGCGAACTTTGCTTCG
GAGGCAAGCGATATGATGGTGAAAAATACAATATTATTTCCATCAATTCGTTAAAGCTCT
ACCAAAATTTAAAATGATGTTCAAAGAGATC
(3211 bp)

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