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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c27020_g1_i2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		unknown_unsecreted_protein_[Papilio_xuthus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:16.13 TPM:12.37
ORF EntryO_BomoASG11468_5prime_partial:A_BomoASG_c27020_g1_i2
Sequence
(Nucleotide)
CTACTGTCCAGTGTCCACCATTTCGTGTTCGACTATCTGAGTGGCAACGTTTACTCTCGA
TAACTGAAAAAGTCTGCAGCGCGTTAAACAAAATTACGCGTCAGATTGGTGTGTTATTTG
TATATTGCGTATCTAAGAACGTGCCGTGGCTAACATTACAGTGCTTTATCGTTGAACAGT
TCGTGTTATATTTAACAACTGATGTGCAGTTGATGCTAAAAGTTCGTGTTTGGCATGCCA
TCGTGGGCGGCCGTGCATCATGTCGAAAGAAATCTCCGAGGAATATGCGTCCAGTTTGGC
GGATCTGACCGTCAACAGCAAGCCATTGATAAATATGCTCACAATTCTTGCGGAAGAGAA
TATCGAACACGCTGGGGTTATCGTTGAAACCGTGGAAAAGCATTTGGAGAAGGTGAATTT
CCATTTTTAACAAAAAATACACTCTTGAAGAGTTATTGTCCACACGTTCACTATATTAGA
GAAAGTGGTCGGTGTTGACGCACACCAGTTGTGATAAGGAATGGTGACACCTGTTAAGTT
TCGTCAAACCTCGTTTGTAACCAGTTAAACACGAGCAGGCATCTCCCAATAAGTATTCTA
GAAATTTTCACTTATTACCACGCATTCGATTAGATATATTTCCTTCTAAATTTATTTTGT
AAGGAAGGTAATTCCTATTAAACAATTAAAATTACATTAAAACCGGACCTGGACTTAGTA
AAAAAGTTATAACTACACTATAAACTCTAGACTTCTTAAGTGAATTTCTTAAGAAAGGAA
ATTGGTTCATGTGCCTGTGTTAATTTTCAGAAACACAAATTAATATTTTATAATTTAAAG
TTATTAAAAGAAGCTCAGTATAAAAATTTTGTCTTATCAAGTGTTGAGGAATATGTAAAC
ATAAAGGGGCCTCTTTAAACGTTTGAACAGAATGATAGATTTTCCCAGCACTTATATGTA
CTTAAGGAATAAACTCATTTGAAACATTTGCTTTCCTGTATTAAATTATGGCAATTATTC
ACAAAAGGCAAACATATGTCATTCAAGTGCAATCTTGAATTCACTACAACAAAATTTACT
CAAACATTTTGATATATCTCTTTAAAATTTTTATTTTATTAGTTGGAAAGCATTTGTATC
GTAATATAAAATATAGGAATAGGGAGA
(1167 bp)

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