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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26665_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		leucine-rich_PPR_motif-containing_protein,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0000961 P negative regulation of mitochondrial RNA catabolic process
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0051015 F actin filament binding
GO:0051028 P mRNA transport
GO:0070129 P regulation of mitochondrial translation
Transcript
Level		FPKM:22.77 TPM:17.46
ORF EntryO_BomoASG10922_complete:A_BomoASG_c26665_g1_i1
Sequence
(Nucleotide)
TGTCTCTTGTTCTAGCAGTTCTAGCACTGAAAGCCGTATTTATATAATAAGATAAATTTA
CTTGAATGTACCCAATCAAATTACAGTCATGTCGTCGTTGTTGAGATCAACGAAATTCGT
TCGGTACTTTACGGGTGCTGCAAGAACACTTATTTTGAATTCTGTGAAAACTGCCGAAGC
CAGTGCATTCCTCAACTCTAAAGCCTTAAGTGCTGCTAACAATGTTTTTGTACGAGATTA
TGCAACAACAAAGAAAACAGAAAGCCTTGACCCTCTGCTTCAGAAATTAGACTCGGAAGT
TAGAAGATATGGACGGATCACAAAAAGAGATATTGATGAAGTATTAGATGAAATTCAATC
TAAAAATGACATTACTAGCTCACAGTCTCTTCTTGTTATAAGATGTTGTGGTGAACTAGT
CCCAGAAGAGCTACCAGAACAAAGAACCTTACTTGTACAGAAAATATGGAGTGTTTTAAC
AGAAAGAGGAATCGCAATGGACATCTCTCACTACAATGCATTGTTGAGAGTTTACATTGA
AAACCAACATCCGTTCTCGCCTGCACAGTTCCTTACAGAACTTGAAAATAAAGGATTACA
GCCAAATAGGGTCACCTATCAGAGACTCATGTGGCGTTATTGCCAAGAGGGAGATGTCGA
GGGAGCAACCAAAGTGCTAGAAAAGATGAGGGAGCTAAGCATGCCGGTTTCTGAGCCAGT
TCTGAACGCTTTAGTCATGGGTCATGCATTCCATGGTGATACTGAAGGAGCTAAGGCTGT
ATTAGAAACTATGGCAGGAGCTGGTTTGCAACCATCAAACCGTACTTATACTTTATTAGC
GTGCGGATATGCAAAACAAGGTGATATTGGGGGTGTCGAAGGCATCCTACAATTAGCTAA
CGAAAAGGATGCCTACATAACTGATAAGGATATATTAGATATAATCGAACATTTAGCCAT
TGGAGGACATGAAGACAAAGTAGAAAATCTATTTAAACATCTTCAGAAAAGCATAGGCTA
CAATCAAGATGTTTGTAACCTTATTCTGAGACTGCTTAACAAAGGACTTGATGAGACCGC
AAAGAAAATATTTGCGACTATGCCCAAATCTTCGCATTTCGAAGATAACCTGTTCAAAGG
GGCCTTCTTTGTGAGACATTTACTAAGATTGAACAGATCCCCAGACTCTATAATTAAAAC
ATGCAAGGATTTAACTCATGAAGGTCTTGTACCAAATGCAATTTACATTGCAACTGAGGG
AGCACTACAATCAGGAAATTGTGAACTAGCTCAGAAGCTATTTAAAGAACTGGTAAACGA
AGGTAAAGAAGTTAGACAGCATTACTATTGGCCTTTACTTGTAAAGAAAGGCAAGGAAAA
AGATGAAGAAGGTCTCTTGCAAATACTGCGAGACATGTCCACAAATAATATTCCAGCATC
AGGAGAGACATTAAGGGATTATGTCATACCTTACTTGACCACAAAAAGTAATGCGCAAAG
CGTTATCGTTAAACTTCAAATAGCGAATGTGCCAGTTATACATGCTGCACGTAATGTGAT
GATTCATCTTCTGGAATTGGGAAAAATAAATGAGGCATCAGAAATAGCGTTGCAATACCG
TCCTCGAGGGCAGTACAATTTAGTGGGGCGGCCCTTAGTTAATGCACTCTACAAAAGTAA
AGATATCAATTCCTTCATCAACATTTTACATGTTATCAGCAGCAAGCCGCCTCTTCAGTC
CGAACAAGACTCAACTACTGACGAAGCTCAAAACGATAGTAAAAATGAAATACGTGATAT
CGGTCGCATTATCAAATCTGCAGTTAAAAGTTTACCTAAGAATGAAAGTGAAGGTATTTT
AGAAGCTGCTTATGCCAAAGGGCTTAGTATTGACATTGAGACAGCTGAAGCTATACAGCA
ATATCTCGGTGAAAATATGACAACGAAGGTGTCGCAATTACTATCAGAACTCAGTTCGTC
TCAATTAGAGCCTGTTCCAATCGAGAGTCCACGAAGGACTGAACAAGCTAATGATCGTTC
AGCGCTCGAAATCGAAAGCATCATCGCTAGATTAAAGGAAAAGGGCACCAATGTGAACCG
TCTTCAAAAACAACTGCTCTGTGCTTATATTAATGAAAAAAACATCGAAAAAGTCAAAAG
TTATCTGAGTGAACTTAGATTGTCTAATTTCGAGTTAAACACAGCCATTTTAGCACAGTT
GTTTGAATTTTTATGTGAAAATGATGAGATTGAACTTGCAAAAGAAATTAGAACAGAAAT
TGAATCAAAGAATGAAGATTTCATATTGAGTCGTCTCAAATTGATTCAAATGGCACAAGC
ATTATTCCGAACCAATAGATATGATGAAGCCATACAGTTTTTAATAGAAAACAAATTTTC
TGATGCTGAAAATGTAGGATTTTTAGTTAATTCTAAATGTTGGCAAATTTTAAACAGCTT
AGCTGAACAAAAGGATTGTGAAAAAGTAAAAGAAGTAACAAAAACGTTGCTCGAAAACAA
TTATGTCCAGGCTTCGAATGTTTTATTTGGTCCTACAATCAAAGCGTACCTTCTTAACAA
TGACGTACAAGGCGCTCTAGTTGAATTTGAGAAATGCTGCAAGCAATATCGTTGCACTCC
TTGGAAGGGAGAATTGATGAAGGCATTAATTATGAAGGAAGATGCTAACCAATTACAGTG
GCTTGCTGATTTAAGTACACAGATACACGGTGAAGTAAACATTCTACATGATTTAGTACT
TGCGTTCGTTGAGTGCGGAAGACTGAGACAGGCACGTCGTATTCTCGAAACACCAGGATT
GCAGGCTCGACACAGACGCTTGGATGACGCTTGTCAGCGATACGTTGAGGAAGGGAAATC
AGAGTACTTGGAAGGATTACTTGAGGCAACGAAAGAACTTTCTCACATTGATCGCTCAAA
CATCTTCTACCATTTACTCGTTACATACTGTAATGCCGATGAAACCGATAAAGCCCTCGG
ACTATGGACACTGCTTCAAGAAGAAAGCGAAGTACCGAGTAACCAATTTCTTGTCTACCT
CGGAAACCATTTGAAATCAAAGAACAGAGATGTACCGTTTATAATTCCGGAAAAAATAGA
AAAAGTTCAGTCCAAAAAGGAAGACATAATCCAAAAAATTGTCACACCTAAAGTACCTCA
GAAACCAACAAAGGCCGAAATCTCCACAAACATCGAGGCCCTTGTTAAAGACGGAAACTT
GGCACAAGCAATGGACGTCTTGCTTAAATCGATTGAAGTAGGCACCATGCCCAAATCGAA
TGTTGTTAAATATTTATTGAAGAATTTGGCCGAGGAGGGAAACGTTGAAAAGATTCAGCA
ACTAGGAAAGAATATCAGCGAAAACACGAAACGTAAAGTTACGTACGATGATAAACTGAC
TTTGGCGATATTCAGAAGAGGCGCTGGTGGACAACACATTGACAACTTATTGGAATCTGT
CGAAGCAGCGAATATACGCGAGGATTTGGAAATAGCTCTCAGGAAATTCCCTAGAAGTAG
TGCACTAGCAAACTTGGTTAATGATACAGAGCTCGTTCAAAAATGCACCAAAATAGCGGA
AATCGCAGCGTCGAAGGGTATAACCACGCCAGTTAATTTACTTTGGATGGAATTGATATT
GGCAGGAAAAGACGAAGAAGCACGAGACTTATGGAACAAATGGCTTATTACGGCACCGGT
CATTGTATTCAGAAGACTGCTACAAGAGAGTTTCGTTAAAAACGAACCAGAAATAATAAT
GAAATTAATAAACGCATTGAAAACAAATAAAACTTTACCAACCAGGTCATTAGGTAATGC
GTATTCAAGATTAATGAACTATTACTTACTGAACAACAACATCGCGGCTGCTGAAGCGTT
GCTGAGTGATGCTATTCAACAAGGTGTACCAAAAGAGCACATTAACAAATCAAGTTTGTT
GAGATTAAAGTCAGCAATCGAAGCAACTGTAAAAGAATTTAAACAGTTCGAAATTTAGTA
ACGCGAACACGACTCCCATAGGTTTATAATCTTTAGTTTTATGTTGCTGGTAAATTTTCA
AATTAAAAAACTAACTACCAGTATAATCTTGAGTTGAAAATGTGTCCTTGTAATATGTTA
GTCAGTGAT
(4149 bp)

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