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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26649_g1_i2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		loquacious_isoform_X3_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:43.24 TPM:33.17
ORF EntryO_BomoASG10890_complete:A_BomoASG_c26649_g1_i2
Sequence
(Nucleotide)
TTCATTCACTCATTTCACATAAATTTAATGTGCAGGTTACATAGGTTGTTTTACGAAACT
GAAGATCTAATTCTGTTCTCTTTTATTTTTCGTATTGTATCCGTTTCATTTTCAATAGCA
AATTTCGATAAATACATTTGTAACTACGGCTGTGGGAAAAATGGAAGGGAATACGGTCCA
CCCGCATCCATCTGTGGTACCGGGTTTACCACCCGGTGTTATCCATGGAATGACAGTGCA
CGGCAGTGGACCGAACGGTGAACACATTCCTCACGGTCCAAGACGCCGCTATCAGACCCG
ACCCAAACCTAATAACTTGCAAAGATTGCCTTTGGACGAGGCGGCCAAGAGGGAAATGGA
ATCACTTCCTACAAAGACTCCTGTCTCTGTTTTGCAAGAGCTGTTGGCACGTCGTGGAAC
TGTTCCTAAATATGAACTAGTCCAGATAGAAGGCATGATACATGAACCCACTTTCCGGTA
CAGAGTAACTGTGGCTGATTTAGTTGCAATGGGCACTGGTCGCTCAAAAAAAGAGGCAAA
GCACTCTGCAGCCAAGGCTTTACTGGACAAGTTAACTGGTGCTACACCAGCTGATCAGAC
TACCAATGGCAATGTTCCTGAAACTGGTGCTGTAGTACCTACATTTGAAGATAAACTAAT
GGGTAATCCTGTTGGATGGCTTCAGGAGTTGTGTATGTCACGATTCTGGCCACCACCATC
TTACCATGCTGAAAACGATGACAATGTTAATAGACCAGTTTCAGGTTTGCCCCATGAACG
TCAATTTACGATCATTTGCACATTGCTCAAGCGCCGTGAAGTTGGTACAGGCAAGTCAAA
GAAATTAGCTAAACGGCAAGCTGCCTACAAGATGTGGCAGGCCTTACAGGACAACCCACC
AGAATCCTTCCAGAATGATGATGAGGGCGGTGTTGCGGCCCGTTATGCCGATTTGAAAGA
TAGTAAAATCTCCACATTGACCACGAGCCATAGCCATAAAGTGTCGCAGTTCCACAAACA
TCTCAAACAGTCTGTTGGCCCCAACCTGGCCAAGTTGCAGGTGACACCACTAAACAATAA
GGATTTTAACTTCGTTCAGTTCTTGCAAGAAATAGCATCAGAGCAATCTTTTGAGGTGAC
CTATGTCGACATAGAAGAAAAGTCTATGACTGGTCTATGTCAGTGTCTTGTCCAGCTTTC
CACATTGCCAGTAGCTGTATGCCACGGAGCCGGCCTCACCAGCAAGGATGCCCAGTCATC
TGCTGCTCAGAACGCCTTGGAGTATCTCAAGATTATGACCAAAAAGTGAAATTTTCAACA
TCTTACGACATCAGCAAAGACCAGTGCGACGACCTATGCATTTGATCTATGGGCTCTAAC
GTTATGAGATTTAATTTTAATGCAGGCCATATCACTATGTGTTTTGTATTGATGTCGTTA
GGTTTTGAGCCTTCATATTGTTGCATCACTTTCCATATGAATAATGGCATTAATAGTACG
CATCTATGTACCAATAGTACTTTGGGCTATGCTTTATAACTGGCATGTTTGCAGTAACCA
ACTTGTTTTTTTTTTTTTGGTTAATTTATGGTAGGCAGTTTGAAACTTATAGCTAAGATA
AGTGAACGAGCTCACGGCCAATCTTGTGTTAAGGAGTTACTGGAGCCTATATACTTCACT
GAGATACTATTTTCAACTCTGTTATTGTTCCCCCGTTTCAAGAGATAATTTTCGCGATAG
CTATTCAATTCTATAATTAACTCCTCACTGAAGTGTTAACAAAGTGCTGCGATATGAGGT
TTATCAACCGAAGTTTAAAAACCGTTCTTAGCAGTCAATTTATTATGTATTCCCTAGACA
TTTATTTCCACCAAGAGCAATAAACATTTAAGCGATTTTAAGCGAAACGGCCGTAAAAAA
AGTGTCACTCTGGCAACTAGCATTGTGATGAAATTAAATCCTTTAATAATTTGCAAGTAA
AAGTTCATTATTTATTAATAAAACTACTGCCAATGTGCGAGGATAAATTGCATAGCCCGT
AATCTTAAAAAACAAAGTATGGAGTGATTTGTCATAAAATACAAGCTATACTTTGCATAG
AATTAGTGTAATTTTCCCAGCGTGGAAATTACGTGTTATAAAAATGTAAAAAAAATGAAA
TAATATGAAAATACAAAAAAAAGTGTGGATTTACATATATTTCCAGTTTAATATTCAGCA
TCTTAGGCATGTTTTTTGCATTCATATTTAATTATTAAAGTATAATCTCAATCTTAGCTT
TTAATCTATTTTATCTATAAATTAACACTATTATTGCGGCGAAGTCAGTATGTTTGACTT
ATTTCGTAAATTCATGTTTAGGAACTATGAATTTTAACTATCATTGGTAAGCCTTTTTAA
TATGCTGAGCATTAAACGGAAAATAGTTTCAGCTAGTGTCTTGTTGACGAACTGCCCGAC
CTTTGCTTTGTAATAAGCTCCGACGTAGCAATTAATTCACTTGAACTTTAAGAACTTTTT
ACAAAGTGCAAGGGTTGGAACATTGATGGTATTGAAGGATTACAGGTCGTTGTTCGTTTT
GTTTGATACCAGTGATTGTGAGTTTTCTTTTGTGTACATGATGGAAAACTTTGCAGGGAA
GTAGAATACTAAATGTATGAGTGAGATGCATCACTCACTGTAAAGAGTTTGTAAAGAGAG
GATCCCTTGCCTGTGAAAATGGGCATTATTTTAATGCAAAGTATAGAGGTTGTAACAATT
TGTACCTGTACAGTGTCGTCGTCGATGTTTGTGATCCCGGCACCGACGAGGAACCTGCAC
GCACCAAGTTTCTTTTAAATTGAATGGTGTGAGTTCAACCTGCCCTTATAAAACATCGCA
CTGTTCAAGTTAGAAAAGACTACTCGAGTAAAGGATTGGAGTTCTGTTCAACCAAGACCC
AACTAAATAAAAACTAATATTTTGTCCGGCCGTAAGGACTATGATTGTTCCACGTTTATT
TTATTTTTTCTTTAGTGAGTCTTGGTTTTACTTATTGTTATTAATTATAATTAAGCTCTA
AATATAATAATATCATGGCTTTTTAACATTTGTCACACCTGCT
(3103 bp)

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