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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26456_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:13.15 TPM:10.09
ORF EntryO_BomoASG10639_complete:A_BomoASG_c26456_g1_i1
Sequence
(Nucleotide)
TTTCTTTCAGAATTCACACGTGAGCTAAACAAGTTCGTTTTGCATAACGAATTATACACA
TGTAAAGTTAATATCGTGATTAGTGTTCAGCGCAATGCCGAAGTCTATCAAGCATCTGAT
TGTGGATACCTCTGCATTCATAAGGGCGGCAAACCTTCAAGACATTGCTGAAAATGTTTA
TACTATACAAGAGGTTATTGATGAAATAACTAATGATAGGCAAAGAAAAAAGCTCGTTGT
CCTTCCATACGACTTAAAAGTCAAGGATGTCTTCGCAGATAACATAAAATTCATTACTGA
ATTCTCGAAGAAAACAGGTGATTATTCTAGCCTCTCTGCTACAGATATTAAGGTTATGGC
ACTGACCTACCAGCTAGAGAAGGAGAAGGTTGGCGGTACGGAACATCTCAAAGATGAACC
GACTATGCAAAAATCTGTTAAAGTTACAGGATTGGCTGGGTTTAACCTTCATCCCAATTA
TGAAAATGCCAATCAGGAAACAGGTGAGAAAGACTCTAATGCAAACAATAACAAAGAGAC
CAGTGAACCTTTACAACAACCCATAGGAGAGACTGTGAATGTTGAAACTGGAGAGTCATT
TGAAGTCAAACACCAACAAAACTGTCAAACAACAACAAATGAAACTGATGATGATAAACT
GGCTGAAGAAATTTCAAAACAAATCAATGATATGGATTTGAAAGATGACAAAGTTGATGA
GCTAATGGTTAAAGTCTCTGATGAAGAGGCTACAGACAGCTATGATGATGATGATGATGA
AGACGAGACAGATAGCGATGGTGGAGAATGGATCACAACCAAAAATTTGGCTGAAAAACG
AAAAGAGATGGAACTTGGTGAATTCAAAGAAAAAGATGTTGAAGTTGCCTGCATCACTTC
GGACTTTGCAATGCAAAATGTTTTAAAGCAGATAGGACTAAATGTTACATCAATAGATGG
AAGAATTATAAGACAATTACGTACATTTATTTTTCGTTGCACAACCTGTTTCAAAACAAC
TAGTGTAATGACAAAACTGTTCTGTCCTAAATGTGGTCATGCAACTTTAAAAAAAGTTGC
AGTGAGTATTGATGAAGATGGTAATCAAAGAATACATATAAATGGACGTAAACCTTTAAC
AGCAAGAGGAAAAAGATTTAGTTTACCTACACCAAAAGGTGGTCAACATTTTCAATACCC
AATTTTAACTGAAGACCAGCATATACACAAAAGATTTGTTACCAAATTAGCAAGAAACAA
AACAAATGCTCTAGATCCTGATTATACTGCAGGATTTTCTCCATTCGCAATGAAAGATGT
GAATTCCAAATCGGCTGTCTTGGGGGTGCGTGCCAACAATCAGGACATAAAATATTGGAT
GAAGCATTATTCTAAAGGAAAGAAGAAATAAATTGAAACAAACACATTCTTATTTATTAA
CTAACTAGGTACATAGACATAAATTTAACATTAATAAATGCTCATTCTTAAACATAACCA
GAGAATAAAAATTCGCTATTATAACAGAGTAGTACCACGTGAATATTCGTTTTAATCCAT
ATTTAGTATTTCATCAAAGTATTTAAAAACAGAATCCATACACATGTATGATGTCATTTC
ATGTTTCTCATGACCTGCAAACAAAGTTTTCTTATATATTTGACACAACACAAATGCAGA
GTTTCAGTGGTTTAAGTCAACCTTTACCAATGGTTGCTTCAATGTTACTATTGCAGCACT
TAATAGTAAGCTTTTAGCTGAACCAGTGATTAATGCTCAGTGTTACTCATGGACAAAGGC
AGTGCAAAGATTTGGATAAGTATGTAATTATAATCTAGAAAATAAGTTCATAGAAGAAAG
AATAGCCATAGTCTATTCCCCTTAAAAACACAAATAATTTGATTTTATGAATGCAATATT
TATACCTGCTGAAAGTCTGGTTATATCGAAATCAGGAGTTCTGAGAGGTGTATCCAGCGG
TGTCTGACTAGATATCCAATTCTTTGTAACCTGTAATATCGAGAAACCAATTAGGAAAAG
TTAAATTTCAACTGTGCATGCCTCCAGTTACATTCTTACCTGTTTCAAAAAGTTTGTAAG
CTTCTTATTAGAATAGGAATGTACAGAGTCAGTAAAAGCAATGGCCTTTACTCTGTCTTC
AAAGTCATTTTGCACCTCTTCTGCCAGAGAAACCGTGACAACCCCACCATAACTATGTGC
TACAATGAGTATGGAACTTGCATTCGCATTGGATATGTAGTTCAGCCATGCGTAAAGGGC
ATGTTCCTCAGCGGTGCTACTGTTGAGAATGGTCTTTCCATCTGCTGTGTGATTGTCATT
TGTATTTAGTACCACTACTCCATAGTCTTTGGCCAAAGCCTTCTTGATATACGGAATCTG
AGATCCTTTGTCCAACGATTCATTGATTATGAGGCTGTGACAAAAATTACATTTCAGAAC
AAATATACTGCAGGCCTAATTACGTGACCTACTTTAAAACAAGACATGGGGAAAACAAAA
AATATGCATTGATTACGTACATATTAATACATAGATGAATAGAGTATTGCCATTGTGAAA
GAAGAACAGAAGGGTAATACCATCATTGTACCAACCAAGGATAATGAACAGAATCAGGAA
TTGAGCCACCATTATATACATATTTCTATATTAATTTTATGATTCAG
(2687 bp)

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