SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26175_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		GDNF-inducible_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.36 TPM:1.81
ORF EntryO_BomoASG10252_complete:A_BomoASG_c26175_g1_i1
Sequence
(Nucleotide)
CGTCGTTCCTATGTTTCGTTTGCCATAGCACGATCAACTCTATAACAAACGAGGCGACGC
GCGAGAAATATCGCGAAGTCATAGGAATGAATTTATGTCAGGATTCGCATTTGTGCCTTA
TATGCAGACACATACTCAACAAATTATGGTTATTCAGATCTAAATGTCTGAAGAGGAGTT
CTGAGTATCCTAGTTTGTTCAGTGAAGATGTTCCTATACGTTTGCAAAGAACCGACACGG
AATGCCACATACTGTGCCCGAAGTCTGACTCATGCCAAACCTTACAGACCGGGTATAGCT
CCCAATACGTTTGTGATGAACGAAATTTGGACGAAAATCGTAAAGACGCAGATGATTATC
ACGTACACCAGCTGCAAGATGAAAGGAATTACATTGATTACTACGAAGATCTAGATGCGC
TAAATGAATTTTACGGCAACGATAATCCGATTGTTGATAAAGGTGCTAACGCTTTAAACG
TTTTGGACGATGATAATATTGATGGCGAAATCGAAGGTAGCGTGCCAGAACAAATAAAAA
TTCAAAATGAATTTATTGAAGATCACGTGCAGATGATAAATGATGATGGAAATGAGGGAT
CAGCTAAATTGGACGATACGAAAACGAGGAAGGTCAAAAACAAGAGGCAGAAAAAGATTT
TAACTGATCTAGAAGAGCAGAAAGCGGTTTTGGACGCTATGAGGAAAGGGAAGAAGTATT
TAGAGGCGGAATTCAAATGTTATAATTGCGCTGTTGGATTCCTATTTAAGGACACTTATC
AGGCGCATATGATGAGACACGAAGAGTCAAACGGTGAATATCGTTGCGAGGTGTGCACCC
TGCGTTTTGCGTGTGCGTCCGTATTGCGCGCGCACAGCAAGACTCATAGTCTAGAACGTT
CTAGACGACGGGTTAAAGTCGACGCGAACGGTACGCAAGTCCCTTGTCACTTGTGCGGAA
GGATTTTCATGGATACGACAAATTTGAAACAGCACTTAAAGAGATTCCACAATCAGAAGA
ACAATAACCGCACGTATTCGTGCAGCGTCTGCGGGAAGAGCTACAGCAACCAGGGAGCGG
TCCGGACACATATGATTAAACACATCAACAGAAAGTTCAACTGCGACAAATGCCCCTCGA
CATTCAGCAGCCCGTACACCCTGAACCAGCACAAGAAGAAGCATGATGACGTCACAGCGC
TGCATCATTGTGAGACGTGTGACGTCACGTACAACAGCCGGAAGAGTCTTATGGCCCATA
AGAGGAATACTTTTGCACATCAGCAGACTGTTTTCGCCTGTCGGGCGTGCAACAGGCTGT
GTCCTACGAAACGCTCCCTGGAATCGCACATGGCCGCCGTCCACTCGGCGACGAAGGACT
TCTGTTGCGAAGTCTGCGACGCTAGGTACACGAATCGAAAGTCTTGGGTGCGACACGTGG
CGACCCACGACCCGAGCAGAGCCAAAGAGGTCTTCATATGCTACCGGTGCCCGAAGACTT
TTAAGTCCCGTAGCATGCTAACCCGA
(1526 bp)

- SilkBase 1999-2023 -