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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26143_g1_i3
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		checkpoint_protein_HUS1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000077 P DNA damage checkpoint signaling
GO:0000724 P double-strand break repair via homologous recombination
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0008156 P negative regulation of DNA replication
GO:0009411 P response to UV
GO:0009790 P embryo development
GO:0030896 C checkpoint clamp complex
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0033314 P mitotic DNA replication checkpoint signaling
GO:0035861 C site of double-strand break
GO:0044778 P meiotic DNA integrity checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
GO:1901796 P regulation of signal transduction by p53 class mediator
Transcript
Level		FPKM:3.49 TPM:2.68
ORF EntryO_BomoASG10212_5prime_partial:A_BomoASG_c26143_g1_i3
Sequence
(Nucleotide)
GAAAAACATATCACTAAGAAATTCCGTGCTGTTATGAATAACTCTTCTCCAATACGCGAA
TTCTCAACTATTGTTAGTACAATATCAAAACTGTCTAAGGAGTGTGTCCTAAGGATAGCA
GACGATATGTTGTATTTCATTGTCAGCGATGAAAACACTGGACCAGCCCCTCCGGTACTA
TGGTGTGAAATACCACAAAGTGTATTTTTCTCTGAATATCAATTGGTTGGAATGGATGAA
ACTCACCAAGACATTTATTTAGGATTGAATTCGGGTAATCTCGCAAGATCTTTTGTCTCC
TTGAAAAATGTAAAATCATTAAAAATGAAGTTAACAAAGAAACAGTGTCCGTGCCTAACA
TTGGAAATTGAAGTGCCGTCTACAACCTCTCATCAGACGAGGCAGATTGTGCATGACATT
CCAGTAGCAGTTGTGCCATGGAAAAACTGGCCAGACTTTTATGAACCCAGAGTACCAGAT
CCTGATATATCAATAGAATTACCAAGTTTGAAACAGCTACGTACAACAATAGATCGTATG
AGAACGATGGCATCTGAGGTGATGGTGCGAGCTTCTGCTGGTGGTCAATTAATCTTACAG
ATCAGAGCAGACATGGCTAAAGTGTCTACAAGGTTTAAAGATTTGAATGTTGCTCATTTT
GATGGCCCAGTAGACAATTCGGACCCTGAAACGGACAGCCAAGGAAATGAAGATAGCTCA
GAAATAGTACAGTGTCGTGTTGACGCAAAGAAACTAGCACTTTTCTTGAACGTTGATCAC
ATATCAACGAATACAACATTATGTAGTATTGTGCACAAGAGACTTGTGACATTGTGCTTA
CAGACAGATGATAATGTTAAATTGCAATGTTTCATAAGTGGAATTGTGTATTGAGCAAGA
AAGGTGTCAAGAAATTCATTAGTACACAGTGATTTATTAAGTTAGGACCACACTGGTGGT
AGGTATCTTGTGAGTCAGTCCACACAGGGAGGTACCACCACCCTGCCTATTTC
(1013 bp)

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