SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26133_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X2_[Bombyx_mori]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
Transcript
Level		FPKM:16.91 TPM:12.97
ORF EntryO_BomoASG10193_complete:A_BomoASG_c26133_g1_i1
Sequence
(Nucleotide)
GAAAGAATGATAAAATGGTGCATTCGTCGATCAAACCGGGCCATACATCCGAAGTCAGAA
ATTAAATTAACATCCACCATTTTGTTTATTTTCGCGTTTATACGACTGTACCCGGCTAAA
TTATAATATATTCGCCTGCCACCATCCTTCGTAGTGACAAAGCGATTCTGGCAATGATTG
TAGGATTAGGAATGTGCTATTAGCGTACTCATTCGTTGTCGGCCCTTGTATTGAAATTTG
CAGACATCGGCCGCGCCGCTAGTAAACATTCTTTGAAAATTAACTCCCAACCTTCGAAGA
AAAACAAAATCCCTAACGCCCAGGGTAATCGCGTCGATGAGAAAGGTTCGTTGAAATTCG
TTCAACGAATTTTCGGCAAGTGTAAAGGGAGTAATCCCTTGGCTTTAAAGGAAATATCGA
AGAGCTTTGGGCGAAAGTCCCCCGTGGCGCGCCCGGCTAACATGAATCACACGCCTGCAC
CTGACAGGCAGCAGCACGACTCCAATGTTAACCAGGTCGTGGAGATGGAGACTCAGGACG
TTGAAACAATTACCACTGAAAAAACCTGGAATGAAGAAATGATGAAGGGTCCTAATGGTG
AGGTTGTCATGGCTGATGTTATGAAGACACAGGAGACTGCCTCAGCTGAGATGCCCCTCG
CCTGTCTTGACGCTGAAATGGAAGACGACGAAGCGCGTTCAGAGGCAACGTTCCGATTCA
CGGTCCACAACTTTAAGAATTTGAAAGACTCGATGCTGTCGCCGCCGTGCTACGTGCGCA
ATCTGCCGTGGAAGATAATGGTTATGCCGCGGCAAGCGCCTTCGCCCGATCGGCAACAGC
AAAAGTCTCTGGGCTTCTTCCTACAGTGCAACGGGGAAAGTGAATCATCCAGCTGGTCTT
GTTATGCGATGGCGGAACTGAGACTCATATCCCACAAGCCGGACACCGAACCTTTCCTAA
GGAAAATTCAACATTTATTTTACAGCAAAGAAAACGACTGGGGCTTTTCTCACTTCATGA
CGTGGAACGACGTGTTAGACCCCGAGAAGGGCTACATTAAAGACGACGCGATCACTCTGG
AAGTTCACGTCACCGCCGAAGCACCCCACGGCGTATCTTGGGATTCTAAGAAGCATACAG
GATATGTTGGTCTGAAGAATCAAGGTGCAACTTGTTATATGAACTCGTTACTTCAAACAC
TTTATTTCACGAATCAACTCCGCAAAGCTGTGTACAAGATGCCTACAGAATCGGACGATA
GTACTAGATCGGTGGCTTTGGCTTTGCAAAGAGTATTCTACGAGTTACAGTTCTGTGATA
AACCAGTTGGTACAAAGAAGTTGACCAAGAGCTTTGGTTGGGAAACCCTTGATTCTTTCA
TGCAACACGACGTACAAGAGTTCCTTAGGGTTTTATTGGATAAATTAGAAAGTAAAATGA
AGGGCACATGCGTGGAGGGCACGGTTCCTCGACTGTTCGAGGGCAAGATGACATCATACA
TTAAGTGTAAGAACGTTAACGTTTCAAGTACCCGAGTGGAAACATTCTACGATATCCAAC
TCAATATAAAAGGGAAGAAAAATATCTACGAATCGTTCAAAGATTACATAAGCACAGAAA
CGCTAGACGGCGAGAATAAGTACGACGCTGGCGAGCACGGTCTCCAGGAAGCCGAGAAAG
GCGTCATATTTGCCACGTTCCCGCCCGTGTTACATTTACACTTGATGAGATTCCAATACG
ATCCCATTACCGACAGTTCGGTCAAGTTTAATGACAGATTTGAATTCTACGAACGTATCA
ATTTAGATGCATATCTACAGGAGAAACCAGAAACACCGGCTGACTACACCCTCCATGCGG
TATTAGTTCACTCGGGAGACAACCACGGGGGGCATTATGTGGTCTTTATCAATCCGAAAG
GTGACGGAAAGTGGTGTAAGTTCGACGACGACGTGGTGTCCCGGTGCACGAAACAGGAGG
CCATCGAATACAACTACGGCGGTCACGACGAGGACATGACGTTGACCGTTCGCCACTGCA
CTAACGCCTATATGTTGGTTTATATCAGGGATTCACAGTTGAAGACTGTTCTACAAGAAG
TAACACAAGCAGACATACCTACTGAGTTGAGTGAGAGATTAGCTGAAGAGAAGAGAATCG
AAACCATTCGTCGCAAAGAGCGGAACGAAGCCCACCTGTATATGAACGTGAATGTAGTAT
TGGAGGAAGCTTTCGACGGTCATCAAGGGAACGATCTGTACGACCCGGAGCGCGCGCACT
ACCGCGTGTTCCGCGTCAGGAAGCAGGCCACCGTCTCTGAACTCATGGAGATATTGTCAG
AGAACTTTAAGTATCCACTGCAGCAGCTCCGACCCTGGCCATTTAGCGCACGCTCTAATC
AGACATGCAGACCGACCTGCCTAGACATTTTTAACGATCAACTCAAGACTGTAGCTGACG
TTTCTGAGAACATGAACCCATGGAACATATTCCTCGAGATGCTGCCTCCAGATTCTGGTC
TCACATCATTGCCTTGGTTCGATAAGAAGAACGACGTGGTCCTGTTTTTTAAGTATTATG
ATCCTAAACAGAAGCGCATACACTACTGCGGACACCATTATTTGCCCATCGCAAGCAAAC
CTGCCGATCTTCTACCTATACTCAATCAACGTGCAGGATTCCCACCAGACACTCCACTAG
TTCTGTATGAAGAAATCAAACCAGACTTTGTTGAAAAAATCAGTAATTACAACGAACCTC
TAGAAAAGGTATTGGACGAGCTGATGGACGGCGACATCATTGTGTTCGAACGTGCCGACA
ACCGACACGACGAGCTGGAGCTGCCCACCTGCCAGGACTACTTCAAGTACATCTTCTACA
AGGTCGAGGTGCAGTTCGTCGATAAAACGGTGCCCAATGATCCGGGATTCACAATGGAGC
TATCGATGCAAATGCGTTATGATCAGATGGCGCGGGCGGTCGGCCAGAGGCTCAACGTGG
ACCCTTACTTAATACAGTTCTTTAAGTGTCAAAACTACAAGGACACCCCAGGACTACCTT
TGAGATACTCATACGACGGAATACTTAAGGACTTATTAGTGTACTGCAAACCAAAATGCC
CTAAGAAATTATTCTATCAGATATTATCTATTAAAGTAAACGAATTGGACAACAAGAAGC
AATTCAAATGTCTATGGGTTGGTCCAAATTACAAAGAGGATAAAGAATTAATTTTGTATC
CAAATAAAGGTGGTAAAGTGTCGGACATTTTAGAAGAGGCAGCTAAAGTAGTCGAGATGT
CAACCGAGGGCTCAGGCAGGCTAAGGATCGTGGAGGTGTCGTGTCACAAAGTGCTACCGG
GTCCGGACCCCGAGCTCACACTCGACCAGGTCACCATATCGCCGCCCAGACTCTACAGAA
TAGAGGAGATACCTAGAGACGAACTGAATTTACAAGAGGATGAGATGCTGGTTCCGTGTG
CGCATTTCTACAAGCAAGTATACGCGACGTTCGGAATTCCGTTTTACGCGCGTTTCAAAC
ACAACGAACCGTTCGAAGCTGTCAAAGATCGCCTACAGAAGAAACTCGACATACCCGACA
AAGAATGGGAAAAGTACAACTTTGCTGTAGTGACAAACGGCAGACCTAATTACATAAGCG
AAGGAGCGACAGTGAATATCAACGATTTCAGACTAAGTAGTAATACGAATCTGTCGCACC
CAGACGCAACGGCGCGGCCCTGGTTCGGGCTCGAGCACATCAACAAGACGCCGAAGCGAT
CCCGCGTCAACTACTTGGAGAAGGCCATCAAAATATACAACTGAGCCGGTCGCCGCGCGC
CGCGTCTCCCCGCCGTAACGCCGCACCTACTCCGCTCACAGCCCGGGACACGGCACCGCC
CATATTCACTTGTAAAGCGACCAGGATCATTATGAACGCGGCTGAAACGAGTACGCGCTG
TAATTTTGTGAAACACTTTTTATTTTTGATTGCATAGACGGGTGGACGAGCTCACAGCCC
ACC
(4023 bp)

- SilkBase 1999-2023 -