SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26115_g1_i1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_SH3RF1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0046328 P regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:3.03 TPM:2.33
ORF EntryO_BomoASG10170_3prime_partial:A_BomoASG_c26115_g1_i1
Sequence
(Nucleotide)
CAGTCTTCCCGCTAACATCGTTGGAATTTAAAATACTTGGTTTAAAAACGGAATGGATGA
AGGTCTGTTGAACGACCTGCTCGAGTGCTCCGTTTGTCTGGAGCGGCTCGATACATCTTC
AAGAGTTCTACCCTGCCAACACACTTTCTGTCTTAAATGTTTAAAGGTGATAGTAGAATC
ACATAAAGAACTCCGTTGTCCAGAATGTCGGATCCTGGTCGAAACGAAGGTCGAGGACTT
GCCTCCGAACGTCCTCCTCATGAGGATACTCGAGGGTATGAGGAATTCAGCCCCGAAGAA
GGTGGTCGGCGTCGGACAGCGGATAAGAGCGGGACACCTCCAAGTACAGCAGGGATCTCT
CTCAGCACGTGACGGTAAACAGTTGCCGCCACACGCCAGAGCCGTGTACGATTACATTTC
CAAGGAGCCTGGAGATCTGTCATTCAAGAAAGGCGAAATAATACTCTTGCAGAAGAAACT
GGACGCGTTTTGGTATCAAGGAGAATGCTCCGGAAGAACTGGAATGTTTCCAATCACTTT
TGTGCAGGTCGTCGTACAATTGCCGGCGGCGACGGCGCTCTGCAAAGCGCTCTACGACTT
CCGAATGTCAGCCCCCGACGAGGAAGGGTGTCTCGCTTTTGATAAAGGAGCTATAATAAC
GGTGCACCGTCGCGTCGACGACAACTGGGCCGAGGGTAGACTAGAGAACCGAGTCGGCAT
CTTCCCTATAGCGTTCGTTGAACTCAACCAGGCGGCCAGGCAGCTTATAAACTGCGCGCC
CCTGAACCGACCCGTGCCGCCGGTCCCGGGACACGCGCGGCCCGGACACTCCGAACACAG
ACATCACTCTCAGCATCCGCATCGCTATCAGCCAATGTCGGTCTCTACACCGGCGACGTC
ACAGGGCAACTACCAGAACATGGCAACGATGACCCAATCCCACCCCAACTACCCGACAGC
GATGCTGGTCCAACAGCCGCAGACGCTGGGCCCCCACGCGGGCCTGCTCTCGACGCCGCC
GCGGAACATTCTCGAACAGCAGTCGAAGCACGCGATAGATCTGATACACTTTAGCAACAA
GGGCCACGGCGTGCTGGGCCTGCAGAGCGTGTCCCGCATCGGCGACGTCAACTACGACAG
GACGCGCGTCAAGTTCGACTACAATTCGACTCCCGCGGACTCGACGTACCAAAACGTGCG
CCCCCCCGTCTCCAACAACCCCAGCTCGGACTCCAGTTCCAGTATGAACACTCCGTCGGT
GGGCGTCAGTTCCAACACCACGCCCAACACCAGCTCTGACACGAGCACCTGTGAGAGCAA
CGAGCCCAGCCTGCCGAGTTCCCCGGACAACAACACCGACCGGACCACCGCGGTCAACGG
GCCCGACCCGGATCCTGACCGACGCGAACCTTCACTAAACACCTCGATGGGAATATTGAG
CCTGAACGAGAGCTCCACCGCAACAAACACGTCGCTCAACGTCAGCCTGCCCCCTTCAGA
GAGTCCCAAACCGAACGCTTCGAATGAAGAGGTACAGGAAACGGAAGAAGTCAGACTAGA
CGCCCCGTCTTCCAGCAAAGTAGTGATCCGATCGAGCGGGCCGGACTCCCTGCTGAACTT
CGGGCTCGGTCTGCAGGCGGCGCTGTCGCCATCTCAAGGCCAGGAGGGGAACTACGTGGT
GTCGAGATCGCACAGAGACCCTCACAGGGAGAGGGAGAAAAGACACAGTCTCACGCCCTC
GACGCATTTGCAGGCCAATCATAATACGCCGAATAGACATTCAGCGGAGATAGTGGCGAC
CAGTCTGCTGGACGCGGCGCCGGTCGGGG
(1829 bp)

- SilkBase 1999-2023 -