SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26088_g1_i1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		methionine--tRNA_ligase,_cytoplasmic_isoform_X2_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004825 F methionine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006431 P methionyl-tRNA aminoacylation
GO:0016874 F ligase activity
Transcript
Level		FPKM:7.03 TPM:5.39
ORF EntryO_BomoASG10127_complete:A_BomoASG_c26088_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTCTCTTACTCACAATGATGATCTCCGAGAACAGTATCTGAAGGAG
CTCGGTAATATAAGGCGTTGGTCTGACGCTATTGGAGGTGCGAAATCTGTTCAAGAAGCT
GTGAGACAATGGGGCGGCTCACCGACTGGACCATTCGGGCAGATATCTGCCCTGGGCTTA
CCACAGGTGGCCAACCTCGTCTCTCCTGCAGGGTCGCCGGATGACGACGCCGAGGTCCAA
GAAGGTCCGACCCCTGAAGAGATCGAAGCGGCAAAAGAGGGATGGCTCAATGGTCTGAGC
AAGCTGCAGCCTCCGTTGAAACAGGAGAAGATTGTGTTACCAGTGAAGGGTCGTAAGAAC
GTACTGATCACCTCGGCGTTGCCCTATGTCAACAACGTTCCCCACCTCGGCAATATCATC
GGATGCGTTCTATCCGCGGACATATTTGCAAGATATTGTCGGTTATGTGATTACAACACG
CTGTATATATGCGGCACAGATGAATACGGAACCGCTACGGAGACTAAAGCGCTAGAAGAA
GGCGTCACGCCCAAACAGATCTGCGACAAATATTTCGAGATACACAATAATGTCTACCGC
TGGTTCAACATTGGATTCGATTATTTCGGGAGAACCTCCACAGAGGAACAGGCTGAGATC
ACCCAGAGGCTGTTTCTGAAGCTGAACGAGAACGGCTTCGTCAGCTCGCAGACCGTCGAC
CAGCTGTTCTGCGAGAAGTGCGACAGGTTTCTGGCTGACAGGTTCGTGGAGGGGACGTGC
CCACATCCCGGCTGCGGGTACGAGGGCGCGCGCGGCGACCAGTGCGACAAGTGCGGGAGG
CTGGTCAACGCGCCCGAGCTGCTGCAGCCGAGGTGTAAGGTCTGCGCCCACCCCCCCGTC
CTCAAGCCCAGCGAGCAACTCTTCATCGAACTAGGGCAGTTGGAGCCGTCGCTGCGCAGC
TGGATGTCGCGGTGGGAGCACCTTTGGTCGGCCCCCGCGCGCGCCGTGGGCCGCGCCTGG
CTGCGGGAGCCGCTGCGGGCGCGCGCCCTCACCCGCGACCTGCGCTGGGGGGTGCCCGTG
CCGCTCGACGGGTACCGACACAAGGTCTTCTACGTGTGGTTCGACGCTCCCATCGGCTAC
ATGAGCATCACCCAGTGCGCCACGAAGCAATACGAGGCCTGGTGGAAACCTGACAAGGAA
TATGACGTCAGTTTATATCAGTTCATGGCGAAGGACAACGTGCCTTTCCACGTGGTCATG
TTCCCGGCGACCGTCCTGGGCGTCAATGAGGGCCACCTGCTGGTCAAGCACCTGTTCGCC
ACCGAATACTTGAACTACGAAGAAGGGAAGTTTTCTAAGTCGAGAGGCGTCGGTGTGTTT
GGCAACGACGCGCAAGACACCGGGATACCGTCGGACGTGTGGCGCTTCTACCTGGCCAGC
ATCCGACCCGAGACCTCGGACTCCAGCTTCAGCTGGACCGAACTGGGCACCAGGAACAAC
TCGGAGCTTTTGAACAACCTGGGAAACTTTTGTCACCGTTCGTTGAGCTTCTGTTCGAAC
GCGTTCAAGGGTCTCATCCCGGAACCGAACCCGCGACGTTCGGACTACGAGCTGATGGCG
CTCGTCAACAGGGAGATAGCAGCGTACGTGCAGAACATGGAGAAGGGTCGTCTGCGTGAG
GCCTTGAGGCACGTGCTGTCCATCTCTAGGCTCGGCAACCAGCACATGCAGTCGGAGCAA
CCCTGGGTGCTGCTCAAAGGAAGCGAGGATGATAAGCAAAGGGGTGCAACAGCCATCGGT
CTGTGTTGCCAGCTCGTGGCGCTGCTGTGCGCGCTGCTGGCGCCCTACGTGCCGGACACG
ACGCGCAAGCTCCGCGGACAACTCAACGTGGACGCCGAAAAGCTCCGACTGAACCCCGAG
AACCCCAGGCTCCTCCGGTACCTGCCGCCGGGTCACATCATCGGGAAACCGGAGCCCTTA
TTCGTGAAGATCGAGCAGGAGAGGCTCGAGGAGCTGAGGGCGAGGTACGCCGGCACGCAG
AGCCAGAGGGCAGATAAGAAAAACTCCAAAACGTTGGATATAGCTGAATTAGAGAAGGCA
ATAGCTGAGCAGGGCGATGCAGTTAGAAAATTGAAGTCGACAACGAAAGATAAGTCAGTA
TGGCAACCGGAGGTTGAGAAGCTGTTAGAGCTGAAGAAACGGCTCACCGAAGCTCAGAAG
CAAGCTGAAACGCGACCAGCAGCGAACCAGGCCGCTGGCGATGTGGCCAGCTTAGAGAAA
GCTATTGCTGAGCAGGGTGACAAAGTCCGGAAATTGAAAGCCTCAACAAAAGACAAGGCC
GTGTGGCAGCCTGAAGTAAATGTATTGCTCGATCTGAAAAAACGTCTCCAAGCACTGCAA
GTCAAGAAATAAATTATTTATTCAGTAAAAAAAAAAAAAGATCGGAAGA
(2449 bp)

- SilkBase 1999-2023 -