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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26030_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		beta-TrCP_isoform_X2_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031648 P protein destabilization
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0042752 P regulation of circadian rhythm
GO:0042753 P positive regulation of circadian rhythm
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045862 P positive regulation of proteolysis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:8.81 TPM:6.75
ORF EntryO_BomoASG10057_3prime_partial:A_BomoASG_c26030_g1_i1
Sequence
(Nucleotide)
GTACTTGACGTCATTCGAACGATGTGTGTTTAGCGATTGTGGTTTTGTATATATTAGAGG
TGTTTTAGTGGACAATTATTAATGTTAAATAATAAATAGTGAAAATGGAGACTGAAAAGA
TGATAGAGGATACAATACCACCTCAGGTGACGTCACTGACAAGTTTGGACAGCGGCGTCA
GACCGGTGCCCAGCAGCCCTGCGTACGCGGCGGAAAGGGACGCATGCCTCAACTACTTCA
CAAGATGGAACGAGACAGATCAGGTGGAATTCGTGGAGCAACTCCTGGCTAGGATGTGCC
ACTACCAGCACGGTCACATCAATGCCTACCTCAAACCGATGCTACAAAGGGATTTCATCA
GTATGCTGCCCAAAAAAGGCCTGGACCACGTCGCAGAGAACATACTGTCGTACCTGGACG
CGAGCTCTCTATGTGCGGCCGAGTTGGTTTGCCGCGAGTGGTTGAGGGTGATATCGGAAG
GGATGCTGTGGAAGAAGCTCATCGAGAGGAAGGTCCGTACGGATTCGCTGTGGCGCGGCC
TCGCCGAGCGGAGGGGATGGATACAGTACCTGTTCAAACCGAAGCCTGGCTGCCAACATC
CGTCACACTCATTCTACAGACAACTATATCCCAAGATAATAAAGGACATACAATCTATAG
AGGACAATTGGAGAATGGGAAAACATAATTTACAGAGGATAAACTGCAGATCGGAGAATT
CCAAAGGCGTATATTGCTTACAGTACGACGACAATAAGATAGTATCGGGCCTTAGAGATA
ACACAATAAAAATATGGGACAGAAAGACACTGCAGTGCGTCAGAGAGCTGCAAGGTCACA
CGGGAGATCGG
(851 bp)

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