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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26007_g1_i5
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:17.72 TPM:13.59
ORF EntryO_BomoASG10020_complete:A_BomoASG_c26007_g1_i5
Sequence
(Nucleotide)
GAGGTAGCATTTTTTCACAACTTCGTAAAATGGCGGACGGCGATGTCGATATAGATTTGT
ACGCCGATGATATAGAATCCGATTTTAATCGCCAGGATGAATTTGCTGGCGAAAATGTGG
ATTTATATGACGACGTGATCTCAGCACCAGCTTCGAAGCCCGAGGACGGTGACGGTCCTC
CCATCATTGCTCCAAACCAGCATCCACCTGAGGAAACTAACGGCAACGCCTCATACCACG
GCCCGGTTCACGGACATCATGGCCGCCGTTTTCAACTTTACGTCGGCAACCTAACATGGT
GGGCAACGGACCAAGATATTGCGAACGCGATCTCGGATGTCGGTGTCTCCGATTTTCAAG
ATGTGAAGTTCTTTGAGAACAGAGCCAATGGTCAGTCCAAAGGATTCTGCGTTATATCTC
TCGGTTCAGATCAATCAGTCAGGATGGTGATGGAACGTCTTTCTAAGAAGGAGATACACG
GGCAACATCCAGTAGTTACATTGCCTACTAAACAGGCGTTGAATCAGTTTGAAAGTCAGT
CAAAGACCAGGTCGACGCCTCCTGGTCCCAATAATCCTGGAATGAGAGGACCCCATCCAG
GCGGGCCGCCTGGTCCTCATCCCGGAGAATTTTTTGGTGGGGGACCGAACGGTCCAGGTG
GGGGCGGACCTCGTATGATGCTCCCAGGTCCGGGTCCGCACCAGCTTCGTGGGCCGCCGC
CGCACCACATGGGCCCACACCAGGGCGGGCCGCATCCCATGCAACATCAGCCGCAGCCGC
ACCAGGCCCCGCCACACCGGCCCCCTATGCAGTTTGCGGGCCCTCCGCAGATGCAACGCG
CGCCGGGCCCGCGTCCGCCGCCTCCCGACTGGGCTGCGCGAGCGCCGCATCCTATGTCTC
AGCCCGCGCCTCATTATGGACCCCCCCATCATGGAATGCCGCATCAGATGCCACCACCTC
ATCCTCAACCCGGCGCACAGGGCATGCCGCCTCCGCACCAGTTGCCGCCGCACCAGCCGC
CGCGGGGACCGGCGCCCATGCCGCAGCATCCTGTAATACCTGGAGCTCCAGCACCACACG
TGAATCCTGCGTTCTTCAACCAGCAGCCACCGTCGCAGCCGCCGCCAATGCAGGCCCCGC
AACCTGGACCACCCGGTCCAGGTGCTCCGTACGGTCATCCAGCCCATGGAGCACCACCTC
CAGCACAAGGGCCTCCACCCGGGTCTAGACAACCGTACGGTCGGCCACCACAGAGCTATC
CGCCTCAAGCGGATCCGGCTCGTCCCCCGCACCACCCGGCACCCATGGTCCCACAGCACG
CGGCCTCCCTGGCGCCCCCCATGCCGGTCATCAGCGAGGCCGAGTTCGAAGAGGTGATGA
GCAGGAACCGCACCGTCTCCTCCAGTGCCATTGCTCGGGCTGTCAGTGACGCTGCCGCTG
GCGAGTACGCCTCCGCCATCGAGACGCTCGTTACCGCCATATCACTCATTAAACAGAGCA
AGGTGGCGCAAGACGACCGCTGCAAGATTCTGATCTCGTCGCTGCAAGACACGCTGCACG
GCGTCGAGACGAAGTCTTACAGCAGCGGCGAGCGGTCCCGCCGCTCCCGGTCCCGCGAGC
GCGAGCCGCGACACCACCGCGCCCCGCGCCGCCGCGACCGCTCTTCCAGCCGCTACCGGG
ACCGCAGCCGCGACCGAGAGGATAGGGACAGGTATTACAGGGATTACCGTGAGAGGGAGC
GCGAGAGGTCTCGCTCGAGGGATCGCGATCGTGCTGATCATTACAACAGGGGACACAGTC
GTGAGGAGAGGGCACGTAAATCTCCAGCTGAAGCGACAGCAGAGGGAACCACAGCCGAGG
CCGGGTCGAAGAGCCGCAGCACTGGAGCGCCGTACTACGACGAGCGGTACAGGGAGAGAC
GCGACAGAGACCCGCCGCCCGCGGATCGAGATCGCGACCGAGACCATCGCAGGGACGCTA
GACACTAGACACTAAAAGAACCATTGAGTGAACTACTCAATATCGCCACATCAGCTGACC
AATTAGGGCATCCAAGATTTTTTGCTATCGGGCCGGCGTCACGTTGAAGTGGAATTAAAT
TGACACTTGACAGTTCTGACAGATGTTTGCGCGGAAAAGGGATTTACAAAAATGGCGCGA
AAGTTTCTGATTCTAAATTCAAACAAACGATTGATTTAATTTAAAATAATTCGTTTGAGC
AACGTTCATGCGAATCAAAATTCATTGACTGCGCGGTTATATGTGGTGACACCGACATCG
TTCCGTCAGCCTAGTCTAATCAAGTGACTTTTGGTGTAAACTAATATTGTGTGGTGCGTC
AGAGGCGACGACCGCGTGCGTGAACTACTGATACTGCCACGAAAATAGCTTCAAATTGTT
GATCAAAAGATGGTGGATCGAGTTGATCTGCTGCTAGGGCGGTTTAGTGTAATCGAGAGC
CTGATTCGACAGATTAGATATTCATTATTTTCAACTTCATATGAAACAAACATCTCAAAT
TAAAATCGGTCTCATACATGAAACATTAAATAGTGATGGTAAAAATGATATCCATTCACA
CTGATGATGAAAATAATGTTATGTTAATTTAGATGACAAAATAGTTTATTACAAATTAGT
AAGTATTATCCCGGAATGCCCATTTGTCTCAGATATATCGTTTGTTTTACGAAAATTGGT
TACACTCTTGGTACAAATCACTGTACTTATTACAGTCAAGTGTGACTGTAGAAAATTAAC
GTAAGACCTATCCAACGCCGACAAGTCGTTTTCAAACATCTAATAATGTATTGTATTCAT
TCACGCATGGTATATTTATAAGGTTAAAAAAGGATGATAAACTTTATATTTAAAACAGAG
AAACATTTTATCAGAACACGACCAATAGCAAATTATCCAAAATTAGAAAAGTGCGCTAGT
AATGAAAATTTTATTGAAAAAGGTCAAAAATATCCTAGTATTATCTTGAATACTTTTGAT
ACAATTGATAAAGATTAAAATATAAATAGTTTTTATTACAAATAAACATTTTACACAATT
ATATCGATAAAAGCAGTTTTCAATCTAAAGCCATGAAACATCTGAAAATTAAGATTGTGA
CTGATTTTATAATTTTTAGTATCAATATTACTCATGTTGATTGTTAATGGATTGAATTAG
TCCAACAAGAACCTTAAAACCAAATATGTTTAAAATTCAATTTTGCTGTTTGTCACAACA
TTCCATGGTCTAAATGTTTGCGAATTGTTTTAAACTTTCATTCGTGGTTTTTTTTTGTAT
TTTCCTATTTTGTAGTAGTCTAAACGTAAGTATTAGGTTAAGTTCAAACAATTTATGGAT
TGTTCCATACAAACTAGACGTGAC
(3384 bp)

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