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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c14907_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		spectrin_beta_chain_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005516 F calmodulin binding
GO:0005543 F phospholipid binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0016199 P axon midline choice point recognition
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030424 C axon
GO:0030506 F ankyrin binding
GO:0030721 P spectrosome organization
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0072499 P photoreceptor cell axon guidance
Transcript
Level		FPKM:63.45 TPM:48.67
ORF EntryO_BomoASG3030_complete:A_BomoASG_c14907_g1_i1
Sequence
(Nucleotide)
ATATTAAGTGTATAATCTATGGTTTTCGCGGTCGGTCTTTCGCTTCGCTCGATGCCGTGT
TCGTACTCGTATTCACGGATGATAGTACAAGTCGTTTTTACATGATTAACGGCTACATAA
AAGTTTCAGACAAAAAGTGAACTGTGTTATGTCAAAAAACTGTTTTCATAGTGTAAGTGG
CGTGGAATCCTATTTATTAGTTCTCAGACGGCTGACCGCCAACTCGCGTATTCTAGTGTA
TTTAGTGTGCTGACGAATTTTATGTGCTTGACTGTGCTGTAATAGCATACCTTGGACTCG
CAGGAGAACAGTTCCGAGCGTGGCGTGGTGAGGCTATAGTTGGTCGCGATGACGACCGAC
ATCTCGGTGTCCCGATGGGACCCGTCCGTCGGCCACGGACAGGAGATCATTGATGAAATC
GAGTACGACGGCGGAAATTCATCGTCGAGGTTATTCGAACGATCGCGCATTAAAGCGCTT
GCAGACGAACGAGAGAGCGTGCAAAAGAAGACATTTCAAAAATGGGTGAACTCACATTTA
GTTCGCGTCGGGTTCCGAATTGGGGATCTGTACGTCGATATGAGAGATGGAAAGATGCTT
ATCAGACTACTCGAGGTGCTGTCTGGAGAGAGACTGCCTCGTCCAACAAAAGGCAAAATG
CGTATCCACTGCTTGGAGAACGTGGACAAGGCGCTTCAGTTTCTGCGCGAACAAAGAGTG
CACCTGGAGAACATGGGGTCCCATGACATCGTCGACGGCAACCCTAGGCTCAGTCTTGGT
CTCATCTGGACTATCATTCTGCGCTTCCAGATCCAAGACATTACAATCGAAGAAACCGAC
AACAAGGAAACGAAATCGGCGAAGGACGCTCTCCTTCTTTGGTGTCAAATGAAGACGGCG
GGTTATAACAACGTGAACGTCCGCAACTTCACGACGTCCTGGCGGGACGGGTTGGCGTTC
AACGCGATCATACACAAGCACAGGCCCGACCTTGTTCAGTTCGAGAAACTGCACAGGAGC
AACCCTATCCACAACCTTAACAACGCCTTCAACGTTGCCGAGGAAAAGCTTGGACTCACC
AAGTTGCTTGACGCGGAAGACATCGCTGTCGACCATCCCGACGAGAAGTCCATCATCACG
TACGTGGTGACGTACTATCACTACTTCAGCAAGATGAAGCAGGAGACAGTCCAAGGCAAG
AGGATCGGAAAGGTCGTCGGTATCGCGATGGAAAACGACAAGATGATGCAGGAATACGAG
TCGCTCACCAGCGATCTCCTGCAGTGGATCGAGCGAACAATCGAGGCGCTCGGCGACAGA
ACATTCGCGAACTCTCTGGAGGGAGTGCGTCAACAATTGATTCAGTTCGCGAACTATCGC
ACCGTCGAGAAACCGCCTAAGTTCGTGGAGAAGGGCAACCTGGAGGTGCTGCTGTTCACG
CTGCAGTCGCGCATGCGCGCCGCCAACCAGCGCCCGTACACGCCGCGCGAGGGCCGCATG
ATCCACGACATCAACCGCGCCTGGGAGACGCTGGAGAAGGCCGAGCACGAGCGGGAGCTG
GCGCTGCGGGAGGAGCTCATCCGCCAGGAGAAGCTCGAGCAGCTCGCCGCCAGATTCAAC
CGTAAAGCTCAGATGCGCGAGACCTGGCTGTCGGAGAACCAGCGCCTGGTGAGCCAGGAC
AACTTCGGGTTCGACCTGGCGGCCGTGGAAGCCGCCGCCAAGAAGCACGAGGCCATCGAG
ACCGACATCTTCGCGTACGAGGAGCGCGTGCAGGCCGTCGTCGCCGTCTGCTCGGAGCTG
CAGGCCGAGAGGTACCACGACATCGAGCGTGTGTGCGCGCGGCGCGACAACGTGCTGCGC
CTGTGGGCCTACCTGCTGGAGCTGCTGCGGGCGCGCCGGGCTCGACTCGAACTGTCCCTG
CAGCTGCAACAGAACTTCCAGGAAATGCTGTACATCCTCGACTCGATGGAAGAGATCAAG
ATGCGTCTCTTGACAGACGACTACGGCAAACATTTGATGGGAGTCGAAGATTTATTACAA
AAGCATGCGCTGGTTGAAGCCGACATCAACGTACTCGGAGAACGAGTCAAGGTGGTGGTC
GGACAGTCGCAGCGCTTCCTGGAGGGCGAGGGCGGCGCGTACCGGCCGTGCGACCCCGCC
GTCACCGTGGACCGCATACAGCAGCTCGAGAACGCGTACGCAGAGCTCGTGCACCTCGCC
GTGGAGCGCAGAAAGCGTTTGGAGGACAGCCGCAAACTGTGGCAGTTCTACTGGGACATG
GCTGATGAAGAGAACTGGATCAAGGAGAAGGAACAGATCGTCTCCGTTGATGACATCGGA
CACGACCTCACTACCGTGTACTTGCTGATATCGAAGCACAAGGCGCTGGAGGCCGACGTG
CTGGCCCACGAGCCGCAGCTAATGAGCGTGGCGGCGGTCGGCGACGAGCTCATCTCCCAG
GGACACTTCGGCGCTGACAGGATCCAAGAACGCCTCCGTGACATCCTGTCGCAATGGAAC
CACCTCCTCGACTTGGTGTCGCTCCGCAAGAGTCGGCTGGACGCCGCCGTGCGCTACCAC
CAACTGTTTGCTGATGCCGACGACATCGACAACTGGATGCTCGACACCCTCAGATTGGTT
TCGTCTGAGGACACCGGCGTTGACGAAGCTCAGGTGCAGAGCCTGCTGAAGAAACATAAG
GACGTAACCGACGAACTCAAGAACTACGCCAACGTCATTCAGCAACTGAAGCAACAGGCG
CAGGAGCTGAGCCCGGAGGACGCCAACAGCGGCGAGGTGCGCGAGCGGCTGGCGGCCATC
GACGCGCGGCACGGCGAGCTGGCCGAGCTGGCGCGCCTCCGCAAGCAGCGCCTGCTGGAC
GCGCTGTCGCTGTTCAAGCTGCTCGCCGAGGCCGACGCCGCCGACCAGTGGATCGCGGAG
AAGCACCGCATGCTCGACACCATGCTGCCGCCCAGCGACATCGACGACGTCGAGATCATG
AAGCACAGATACGACGGCTTCGACAAGGAGATGAACGCGAACGCGTCCCGCGTGGCCGTC
GTGAACCAGCTGGCGCGGCAGCTCGTGCACGTGGAGCACCCGCAGGCGCCGCGCATCCAG
GACCGCCAGCACCAGCTCAACCACGCCTGGAGCGCGCTCCGGGAGAAGGCTGAAGCGAAG
AAGGATGAGCTTAAGTCCGCTCAAGGTGTGCAGACATTCCACATCGAATGTCGCGAGACC
GTCTCGTGGATCGAGGACAAGAAACGCATACTGCAGCAAACCGACGACCTCGAGATGGAT
CTTAACGGCGTGATGACTCTCCAACGTCGTTTGTCCGGAATGGAGCGCGACTTGGCCGCC
ATACAGGCTCGCATCTCGTCCCTGGAGAGCGAGGCCAGCGCCATCGAGAACGAACATCCC
GAGGAGGCACAACTCATTCGGGAACGCGTCGAACAGATCACTCAGAACTGGGAGCAACTC
ACTCACATGCTGAAAGAACGCGACTCGAAATTGGAAGAGGCCGGAGACTTACATCGTTTC
CTGCGCTCCGTCGATCATTTCCAGGCGTGGCTCACAAAGACGCAGACCGATGTTGCTTCC
GAAGATATCCCATCAAGTCTGCCTGAGGCTGAGAAACTCCTTTCTCAGCACCAAACCATC
AAAGAGGAGATTGATAACTATAAGGATGAATATGCTAAGATGATGGAATATGGAGAGAAG
ATTACTGCCGAACCGTCCACCCAAGATGATCCACAGTATATGTTCCTTCGCGAACGTTTG
AAGGCACTGCGCGAGGGATGGGCCGAGCTGCAGCAGATGTGGGAGAACCGACAGCAGCTC
CTGGCGCAGAGCCTCGAGTTGCAGCTATTGCAGCGTGATGCCAGACAGGCTGAAGTTTTA
CTTGCACACCAAGAACACAGGCTCGCCAAAACCGAGCCTCCGACAAACTTGGAACAGGCT
GAAAATATTATCAAGGAACACGAGGCCTTCCTCACTACGATGGAGGCTAATGACGATAAG
ATTAATTCAGTTGTGCAGTTCGCTAATCGCCTCGTCGAGGAGAGGCACTTCGACGCGGAC
AAGATTCAGCGCAAGGCGGAGAACATCGAGGCACGCCGCAATGCCAACCGCGAAAAGGCA
CTTAACCTCATGGAGAAGCTCCAAGACCAGCTTCAGTTGCACCAGTTCTTGCAGGACTGC
GACGAACTTGGAGAATGGGTTCAGGAGAAGAACGTTACCGCACAAGACGATACCTACCGC
TCCGCCAAGACTATCCACTCTAAGTGGACCCGTCATCAGGCTTTCGAAGCTGAAATTGCG
GCCAACAAAGAACGACTGTTCGCTGTGCAGAACGCCGCTGAAGAGCTCATGAAGCAGAAA
CCGGAATTCGTTGAAGTAATTTCGCCCAAGATGCACGAACTCCAAGATCAATTTGAAAAC
TTGCAGACTACCACCAAGGAGAAGGGCGAGAGGCTCTTCGACGCCAACAGGGAAGTGCTG
CTTCACCAAACCTGCGACGACATCGACTCATGGATGAACGAACTTGAGAAGCAAATTCAG
AGCACCGATACCGGTAGCGATCTGGCCTCCGTCAATATTCTCATGCAGAAGCAACAGATG
ATCGAGACCCAGATGGCAGTGAAGGCGAAACAGGTTACGGAACTGGAAACTCAGGCGGAA
TACCTGCAGAAGACCGTGCCTGACAAGATGGAAGAGATCAAGGAGAAGAAGAAGACTGTT
GAGCATAGATTCGAACAACTCAAGGCGCCATTACTCGAACGCCAACGTCACCTTGCCAAG
AAGAAGGAAGCCTTCCAGTTCCGTCGTGATGTCGAAGACGAGAAGCTGTGGGTCCAGGAG
AAGATGCCCCTGGCCACAAGCACCGACTACGGTAACTCATTGTTCAACGTGCAAATGTTG
CAGAAAAAGACTCAGTCGCTGAAGACGGAGACCGACAACCACGAGCCCAGGATTCTGACG
GTCATCTCTAACGGACAGAAGCTGATTGACGAGGGACACGAAAGTTCGCCCGAATTCAAA
CAGCTTATTGACGAGCTCACTGCGAGGTGGCGAGAACTTAAGGATGCCATCGAGGAACGC
AAGAACAATCTGTCGCAATGGGAGAAAGCACACCAGTACCTGTTCGATGCGAACGAAGCG
GAAGCCTGGATGAGCGAACAGGAACTCTACATGATGGTGGAAGATCGAGGCAAGGATGAG
ATCTCTGCGCAGAACCTCATGAAGAAACACGAGATTTTGGAGCAAGCTGTCGACGATTAT
GCACAGACTATCCGTCAATTGGGAGAGACTGTCAGGCAGCTCACCGCCGAAGAACATCCA
CTCAGTGAACAAATTTCCGTGAAACAATCGCAAGTAGACAAGTTGTATGCAGGACTGAAG
GACTTGGCTGGCGAGAGACGAGCCAAACTCGATGAAGCTTTAAGATTATTCCAACTATCC
CGCGAGGTCGATGACCTTGAACAATGGATCACAGAGAGGGAACTCGTCGCCAGCAGCCAG
GAGCTGGGACAAGACTACGATCATGTCACGCTGCTGTGGGAACGCTTCAAGGAGTTCGCG
CGCGAGACCCAGTCGGTGGGCTCGGAGCGAGTCGGCACGGCCGAGCGTATCGCCGACCAG
ATGATCGCCATGGGACATTCTGACAACGCCACCATCGCGCAGTGGAAGGAGGGCCTCAAG
GAAACCTGGCAGGACCTCCTCGAGCTCATCGAGACGAGGACACAGATGTTAGCGGCGTCC
CGCGAGCTGCACAAGTACTTCCACGACTGCAAGGACACGCTGCAGCGCGTCAACGAGCGC
GCGCGCGGCGTCAGCGACGAGCTCGGCCGCGACGCCATCAGCGTGTCCGCGCTGCAGCGC
AAGCACCACAACTTCATGCAGGACCTCACCACGCTGCAGCAGCAGGTGGAGTCCATAAAG
AGCGAGTGCTCGCGGCTGGGCGCGTCGTACGCGGGCGAGAAGGCGGCGGAGATCACGCGG
CGCGAGCGCGAGGTGGCGGACGCGTGGGCCGCGCTGCAGGCCGCGTGCCGCGCGCGCCGC
GCCAAGCTGGAGGACGCCGACCGCCTGTACCGCTTCCTCAGCCAGGTCCGCACGCTCACG
CTCTGGATGGACGACGTCGTGCGACAGATGAACACCGGCGAGAAGCCCAGAGACGTGAGC
GGCGTCGAGCTTCTGATGAACAACCACCAGTCGCTGAAGGCGGAGATCGACACGCGCGAG
GACAACTTCTCGGCCTGCATCTCGCTCGGGAAGGAGCTGCTGGCGCGCCAACACTACGCC
TCCGCGGACATCAAGGAGAAGCTACTGCAGCTGACGAATCAAAGGAATGCCCTGCTGCGA
CGCTGGGAAGAACGCTGGGAGAACTTGCAACTCATACTGGAAGTGTACCAGTTCGCTCGC
GACGCGGCCGTGGCGGAGGCGTGGCTCATCGCGCAGGAGCCGTACCTCATGTCGCAGGAG
CTGGGGCACACCATCGACGAGGTCGAGAGCCTCATCAAGAAGCACGAGGCCTTCGAGAAA
TCCGCAGCGGCACAGGAGGACCGGTTCAGCGCTCTGCAGCGACTCACCACCTTCGAAGTG
AAAGAGATGAAGCGTCGTCAGGAAGCGGCCGAAGCGGCGGAGCGCGAGAAGCGGGAGCGC
GAAGCCGCCGAGGCCGCCGCCGCCGCCGCCGCCGCGCAGGACGCGCTCGACCGCGCCGAC
ACGCCGCACGAGCAGCCCGCCGCCAACGAGGCGAGCTCCGTCCCGAACCCCGCCGCCCTC
GCCGCCCCCGCTGACCCCGC
(6800 bp)

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