SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c13703_g1_i2
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PDZ_and_LIM_domain_protein_Zasp_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:12.49 TPM:9.58
ORF EntryO_BomoASG2645_3prime_partial:A_BomoASG_c13703_g1_i2
Sequence
(Nucleotide)
CTGTATCAGAGCGTATAGCTATAGTGCAGCATTGTATATTGTCGGATGGCGCCATATCGC
CGTCAGCTGCTTTGAATGCTTTAATGCAGTAGACGGCGTTGCTTGCGACACACAGTTCAT
GAGTTGCCCGCCGGACCCGACTGTCCGGACCGGCCATGCAATACACATTATCTCACACGT
AACGACCGTTCGATATCAACAACTCTGTTAGTAAGCACATTCGACTTTTGTGGTATCGTC
ATCGGTTCGACCTTAGAAGGCCGCAGCTGTGTAAACTTACCTGCATGTCGGCAATCATGT
CGATGGCACAGTTAATAACTGTGCGGCTTAACAAATCAGATCATCAACCCTTGGGCTTCA
GGCTGCAAGGAGGCAAGGACTTCGGCACCCCACTAGTCGTTCAAAAGGTGAATGGCGGCA
GTGCGGCAGAGCGGGCTGGCTTGCAGGCCGGCGACGCTCTGATTCGCGTCAACAACACAG
ACGTGTTCACCCTGCGTCACCAAGACGCGCAGGACACCATCCGCGCTGCTGGTGCTAATT
TAGAACTAACCGTTCAACGCGGGGGAGGTACATGGCGTCCATCAGTGACCCCGACCGGCA
GCTTGCCGAGACCCGGCTCTCGTCCTCTGGGAGGTACTCCGACTCCGGTGACGAACACAT
CCTTGAAGGCGAACCCACAACCGTCGCGCAATTTCGGCTCCGGGCACAACAATGTCGCTA
AGCCTTTCGGTTATATGAACGGTAACGACACCGTCAAGAGTGTCGTGAACAAACAATACA
ACACTCCTGTCAATATATACAGCGACAAGACAATTGCGGAGACCCTGTCGGCCCAAACCG
AAGTACTGGCTGGTGGAGTACTCGGAGTTAATTTCAAGAAGAATGAGAAGACGTACGATG
CTGAAAAAAGCGCTGTTTTCAAAGTACTTCAGGAGGAGCAAAACGACCCTGAACCAGAAG
TGTCGACTCCGACCACCGGCTCAGTGCCCCCGGTGAGCGGACTCCGGCACGTGCAGGCGC
CCGTCACGCGACCCGACGCGCCCGTCAACAACACGGGCGGCCTGCCTCCCGGACAGAACA
TTTGCGAGGAGTGCGAACGATTAATTACGGGAGTGTTTGTGCGCATCAAGGACAAGAATC
TTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGGAGCTCTTTGAAGAATCAGGGCTATT
ACAACATAAACGGTAAACTGTACTGCGACATCCACGCCAAGCTGGTCGCACGTCAGAATC
CACCAGCGCCGAACTTGGACCCTGTAACCGTGCCACCCGGTGGCCGAGTTCCTACCAACA
CATACTCTACGCCTTTGCCGCCACTGTCTACCAATAACTACAGCAATGGATCGTCTTCGC
TGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAGCCGTTCGGGTCGTCGGTGGGGTCCG
CGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCGCTGTCCCCCGCGCGGCCCCTCACCG
CGCCCGCCCCGC
(1512 bp)

- SilkBase 1999-2023 -