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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c13443_g2_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:91.75 TPM:70.37
ORF EntryO_BomoASG2535_complete:A_BomoASG_c13443_g2_i1
Sequence
(Nucleotide)
CCAGATGATAGACGTCCTCCATACGGTCAATCTGGAAGCCAAGACATCAGTCTTGGAGGT
GGAATACCATACAACCCCGAATCAGTAAGGCAACCAGACAACAGAGATCCCTATGGCGGC
CAATCCGGTGGTGAATATGATCCCTATGGGCGGGGCGTAAGTGGAACAGACGACAGACGT
CAACCTGGAAGCCAAGATGTTGGTCCAGGAGCTTCGGGTCAAGGCAATTCAAATCAACCA
GAAAACCGGCCCTATCGTCCTGAAAGTGGCAATAGCGTTTATGAGACGGGTGAGGGGCAA
TATGGATCTGGTAGTCAAAGAGGAGACAGAGGTCCCATTCCGTTAAATATCAAAACATAT
CCGCAAGACCAGGAATCTGTCAGATACGGTGGTGATGTAGTGCTTCAGTGCCGTGATGAA
GGCCCTCGTCGTGCACCCGTGAGATGGATCCGAGAAGGTGGTAGGCCGATGAGGCCAAAC
TACCAGGAAAGAAAAGGACGACTGGAACTGTTTGGTGTTACCCCATCCGATAGTGGTGTA
TACATATGTCAGGCACCATCTTATCTGAGACAGCCTGGTGCGGAAGTTCGAGTTACTTTG
GAAGTGGAGACGAGCCCTGTGACCGTGCGGCCAGTGTTCGGTGTTTGTAAGCCACATGAA
GCCACTTGCGGTAACGGGCAGTGCATACCAAAATCGGCTATTTGCAACTCTGTTTTCGAC
TGCGCTGATCATTCAGACGAAGATGGCTGCGGAGCCAGTGGCCAGTGCGAACCGAACGAG
TTTGTTTGCGCGAACCACAAGTGCATTCTTAAGACCTGGCGTTGTGACTCCGAGGACGAC
TGCGGCGATGGTTCTGATGAACTTAACTGTGGAACCCCAACTCCTGGAAGCCCTTGCTTG
GCGGTAGAATTCTCATGTGCTTCTAACAACCAATGTATTCCGAAGAGCTTCCACTGTGAC
GGACAATCTGACTGCGTTGATGGCTCTGATGAAATCGGATGCGCTCAAGTATATATCACG
AAACCCCCGCAACCTTCATACGTGAGATTGAATCCGGGCGACTCGTTGACTCTAAGATGT
GAGGCCGTTGGTGTACCTGTTCCACTAGTCTCGTGGCGTCTCAACTGGGGACATGTTCCA
CCTCAATGCACCTTTACCAGTGACAACGGTATCGGAGTTTTGACATGTCCAAACATGCAG
CCCCAACATAGCGGTGCGTATTCGTGCGAGGCCATCAATAATAAGGCTACGACATTCGCG
ACACCGGACGCAATCGTACACGTGAATAGAACCGATCCTTGCCCCGTTGGATATTTCAAT
AGCGATGCGCGTTCACAAAGCGAATGCATCCAGTGCTTCTGCTTCGGCGAGTCCACGCAG
TGTCGCAGCGCGGATCTGTTTACGTACAACATGCCGACTCCTCTTGGAGAAGGCGGCACC
AGATTCGTCACTGTCACTCATCAGGCCAGAGGCGACATCAGTATCGGCGCCCCGATGAAC
AACGAATACTTCTATCAACCTTTGAGGAACGGAGCTACTGTGACCAGAATAGTCCCCGGA
GACATGGGCTGGTTCAAAGATGCTCATCCATACGTGACCTTACCAGAAACCTACAACGGT
AACCAGTTAACTTCATACGGTGGTCACATCAAATACACCATCTCGCCTCACGGATCCGGA
TATGGCTCAGATGACACTGCACCAACCATAATCATCAAGGGGAAATACTTCACTCTGTTC
CATTACTACCGCGGCGAGACGACTAAAACTATCAACATCGAAGCTCGTTTGACTCCCGAG
AACTGGCTGATTCTGGACGAAAACGGCGTTCAAGCGCCAGCGCAGAGATCGACCATCATG
ATGACATTGGATAACGTTGAAATGATACTCCTACGCGCTGATCTGCACAATGCGGGCGTG
AACATCACAAACTTCGCAATGGAATCCGCGCAGCACATCAATGTTGGACTCGGTGCTGCG
AGTCTGGTTGAAGAGTGTACTTGCCCGCCTGGATACGAAGGACTTTCATGCGAGAAATGC
GCTGTTGGCTATACCCGTGATCAATCTGGGGAATGGTTGGGTACTTGCGTCCGCGAGACC
TGCCCGCCAGGTACTTACGGAGACCCAAGTAGCGGATATGCCTGCAAGCCTTGCCCTTGC
CCATTGACCAACAGGGAAAACAACTTCGCCTCCACTTGCGCACTGGGACCTGACGGCACT
GTTCTCTGCAATTGCCGACCGGGCTACGAAGGCAGCAACTGTAATATCTGTTCGTCTAAC
TACGAAGGAAATCCTCTCATGCCCGGAGACTCGTGTAAGCCTAAAGCTACCAAGAAATGC
AACCCCGCCGGTACAAAGCAGGTTCGATTCCCTGACGAGTGTGCGTGCAAGGTCAACGTA
CAAGGACGTCATTGTGACCAGTGCAAGAACGATTCATTCTATTTGTCTGAAGACTTCAGT
CACGGATGCGCTCTCTGCTTCTGCATGGGCGTGACCCAGCAATGTACAAGCAGCAACCTA
AGACGTACAACCACTGCCGTTCAATTCAACGTGCCCAACATTGTGAACCAAGTCAGGATT
TACAACAGTTCAGCTGGTAGAGCACTCCAGGCTGTACGGTACAGTGTGCCGGTTGAAACT
GAAATGAGACCTCGGATCTACAGCGGCAGTATAGATGTACCGATACCGGCAGTCCGGGAC
AACGTTTACTACTGGAGCTTACCAAACGGTTTCACCGGTGACTTGGTGACGGCCTACGGT
GGTTACTTGAGGTACACTTTGGATAACGTTCCGATATCACTAAACAGCGCTCCGGACGTA
CAGCTCATCAGTAACACGAACCCTACATTCCATTACACTGGCAACTTCGTTCCATCATAC
GACGGAACCCTAAACGTTTCGATACACCTTCTAGAAACCGGTTGGAAAAGGTTTGACGGC
ATAGAAATACCTCGAGAGCACTTCTTAGTGGCTTTAGTTGATGTTAAAGCCATTCTTATA
AAGGCTACGTATTCCCAAGACTCACCAATGGCCATTCCGATTAGTGCTAGTATCGATAAG
GCTGATCCTAATGGGGAGGGACCGGCCGCTCTACACGTCGAACAATGTGTTTGTCCACCA
GCTTATACTGGGACATCTTGTGAAACCTGCGCTCCTGGTTACACTAGGGGTGATCGAACT
ATATACTTGAAAGAATGCATACCTTGCAACTGTAACGGTCATTCGAATATGTGTAATCCA
AAGACAGGGGTCTGTTACGACTGCAAGGATAACACGGATGGTCCCCAGTGCGAACTCTGC
AAGCCTGGATACGACAGAGACGGCTACGGCAACTGCGTTGAATCCGATAACTTCATCAGC
ACCCAGCAACCTTGCAGATGCAATCCTGACGGCGTCGAAGTACCATGTGACGAGACTGGT
ACCTGTTCTTGCAAGCAGAACGTCGAAGGCGATTACTGTGACACCTGCAGACCTGGAACC
TACGGGCTGGATCGAAACAACCCTCAGGGATGTCTCTCGTGTTATTGTTCCGGCGTCACC
AGCGAATGTCACGAGGGCGTCCACTACAGTAGAATACCGATGGCCGCACCAGTTTTCGGC
GAAAACAACGGCGGCTACAGCCTCACCGACTTAAACGCAGAAAAAATATACAACGAACAT
TTCGTACCAGTTCCCGATAAAAGCGAGCTCATGTACATATTCTCGTACCCACCCGAAAAC
GAACTGTATTGGTCGTTGCCCATCTTCCCTGGTAACAGAGTACTGTCATACGGTGGTTCG
CTGTCGATAAGACAAGAGTTCCGAAGCAACAACGACGATGCGGTCTCACAGAGTGGCGTC
GACGTTGTTCTTGTCGGCAAAGACGCTTCGGTGTACTGGTCCAACCCGACTCCGATCCGA
TCCGGCGTGCCTCTTAATTACCAGGTGATTTTGAGCGAAGACAACTGGTTCCTATTGAAC
ACGGCCACGCCGGTCACTCGAAACACCTTCATGAATGTCCTGAAGGACCTGAAGCGAGTG
CTTGTTCGTGCTACTCTCGATCCCAACGTACTGTCGACATCTATCGCTGACGTGTCCATG
GACACTGCCACTATCATGTACGAACAAGATTTGCCTGTTGCAAAGGGAGTCGAAATCTGC
ATGTGTCCAGCCGGATACACTGGCACCAGCTGCGAGAGTTGCTCGTCTGGTTACTACAAG
GACGTGTCTGGTCGGTGCCAACAGTGCTCATGTAACGGCCACGACTGTCAACTCGACGCT
TACGGACAGACTATATGTAACTGCCGCCCCCCTTACACCGGCTCTGATTGTTCTACCATC
GCCGGTGAGCCCTCGGTGACTACACCGCCTAATCAACCGCCGCCCGAAGTAACGGTGTTC
GTGAGAATCATTGAGCCCTCGAACATAAGGGACCTGCACGTCGGTAGCAGTGTCAACTAC
ACTTGCCAGGCTCAGAGTCGCATTACGAACAGACTCCGCATCGCGTGGTCCAAGGCTGAT
GGCTACTTGCCTCAAGGAAGGTCGCAGGTCGACGAAAACAGTGGTGTCTTGCTCCTCACT
AACCTTCAGACATCCGATAGCGGCCAGTACATCTGTCAGACAAGCGACGGATACTCAACG
GCTCAAGATGTCGTCACTCTTATAGTGCCCGGTAATGATATGACCCCGCCCACGGTATCG
ATTCGTCCCATCACAACTGACTACTATGAAGGTGATAGGATCGAACTAGAATGCACGGCA
ACAGGAAACCCAGCTCCTTCTATCTCATGGCAGAGGAACTCTAGAAGACCTTTGCCGGCG
TCCGCTGAATCGTTCGATGACCTCTTGATAATTGAAAGTGCACGCCAAGAGGACTCTGGA
GAATACAGGTGTATCGCTTCGAACGCAGTCAGTACAGAAGTTACTAAAGTCACGATCAAT
GTACGTGCAAAACCATCTTGGCCATCTCAGGAGAAGCTAACAGTGTCTCCGACATCTCTC
TCAATTGACGAGGGCCAAAGTTCTAGGGCTGTCTGTACTGGCACACAAGGCGTTCCGGCC
GGCTCCATTGAGTGGATCAGGCAAGACAATGCTCCGTTCGTGGCAAACGTGCGGTCCGAT
AACGGGGTATTGTACATCGAATACGCTCGACCCGAGAACGATGGCATCTATGTCTGCCAG
AGCTCATCGTCGAATGTCTCGCCGCAATCGATTATCATAACAATCATACCGACATACAGT
CCTGACCCCGCCAAAGAGTCGAACATCAGCATTTCGGTCGACAGCTTGAAGGTACCGGCT
GGTGGAAGCGGAAAGATCGACTGTAATCCTGACGGAACAATTCTACCTACCATCAAATGG
AGCAAGCACGGCGGAGAATTCGGAAGCGAAACAAGCCAACGCGGCAACACTCTCATAATC
AACAACGCCAAAGAGGACGATCAAGGATACTATCTGTGCGAGGGAATCGTTAACGGCGCC
ACCATAGCCAGCTCATACGTCTACGTCGAGATCGAAAGACGTGACCCTCCGCAAGTGGAC
ATCTGGCCCCAAGGCGAGAGAGCAGTCACTCTGGGCACAGAATACGAACTCATCTGCAGA
GTTCTTGGTGGAGTCCCTGAGCCTGACGTCATGTGGAGTCGAGGTGGAAGTAGACCGCTG
TCCTCGTACGTCCACATCCGTCCGCAAAATACGCTCAAGTTTGACCACGTCGACGTGAAC
GACGAAGGCGAATACTTCTGCACGGCTACGAACGTGGCCGGTACAGCCACGGCTCGTTCC
GTCATCAAAGTGAGATCGCCGCCGGTCATCACCATCACGCCGGCGAGCTTCCTAGAGGCA
CCTCTCGGTAGTTCCGTGACAGTCGAATGCAGAGCCGACGGGTATCCCCTACCAATGGTG
TCCATAAAGACAAGCGCTGATCTCCGCGAGCTGGTGCGGCCCACACCCAGCTTAGCAGCA
TTGAAGATACCGTCGATAGCTGAGCGCGACGACGGCGACTACATTTGCACGGCCACTTCT
GCGGCCGGCACCATCGAGGAGCCGTTCGCGATACGCGTCAGCCGCGGAGACATTGGAGTC
GAATACGAATTTGGTGGAAGCGGCGATGACGAGTTCCCCGTTGACTACAACCCGAACAAC
CCGACCGGGAGATCAGACACGTTGATCGCTTATGAAAACGAACCAGAAATAACCATCTTC
TGCAACAGCTCCGAGGGCTTCAACGCACGCTGGGACCGAGGAGACAGACAGTCACTGCAA
AGAAATGCGTACCAAGTTGATTCACGTTTGATCATCCGTGGTGTATCCAAGAGCGACTCC
GGCTTGTACGTTTGTAGTTTGTACAACCGCTACACCGGAGAGGTGGTGAAGGCGAACTAC
ACTAATCTCCAAGTCGTGACCCGACCTAAGATAACGTTGAGGCCGGCCAACCAAACGGTC
CGACCTGGTCAGTCGCTCACGGTCGAGTGTCTCGTCGAAGGAGATGAAATTCTAGACGTC
ACTTGGAGATACGACAGGGAGCCTTCTAGACGTGTCGAAATCCGTGGCCCAGTTCTGGTC
TTTAACAACATCGAAGTGGAAGATGCCGGCATATACTATTGCATAGCTCGCAGCCGTTAC
GGAAACGACACCGCCACCGCCAATGTCATCGTAACCGAAAATACCGATCGTCCGACCGTG
GAATCTCACAATAACGAACAGTACGCGCATTCCGGAGCCGCCGTCCACCTGGGCTGTAAC
GTCTCGCAGCCCAACTTGAGGATATACTGGACTAAGGACGGTCGTCCCGTCCCGAGGTCG
CGCCAGAAGACCGACGGCTCACTGTTCATCAAAGTAGCCCAGAAATCGGACAGCGGCCGT
TACGAATGCTTCGTCCGAGACCAATACGGAAGGAGATCTAGCAATTACGTCAACTTGCAC
ATCGAGGGAGCACGCGACGCAAATTCTGCTTCGCTGGTGTACATCGATCAGCCACGCAGA
AAGTTCAGGGTTTCGGAGAACGTCGAAGTTATCTGTAAGGGAAGATCTCGAGATGTCACC
TTTAAGTGGGAGCGTCCCGACACCAACTTGTACCTGGTTACTAATCCGTTCGGAGGCGGT
TCTCGGCTGCTGATAAACAGCGTCCAAGAGTCCGACGCCGGCGTATATCGCTGCATCGGT
ACAGATCCATTCGGCATCTCCTCGTACGACGATTTCGTTTTGGAGATCGAACCAGGTTCT
GGCAACGCCGTCTATCCCGGCAACAGAGACCTGCCCGTCACCCATTACTCAGCTCGGCTT
CGCGAGGCCGTCGACATGCCCTGCAACCACGACCTAAACGAGCCAGTCATTATCGAATGG
AAACGAGAATATTCGCCGCTTCCCGCTGAAGTTCGAAGCAATCAGCCAATCCTACACTTG
GAAAGCGTGACAGAAGCGGATGCCGGCATCTACGTCTGCCGCGTCAGCAACCAAGAAGTA
ACAGTTACAGCGAAGGCGATCCTTAGGGTGATCGGTGTGGTTCCACTCTTCAAAGGCAAG
AGTTGGTTATCACTTCCACCTCTGAAAGACGCCTACAGACAATTCGACATTGAAGTCTAC
TTCAAACCCACCGATCTGAACGGCCTGATCCTGTACAACAGCCAAAATCAGGGTAGAACC
GGTGACTACATCGGTCTAAGGTTATTGGATGGAGTACCAGAGTTCATATTCGACGCTGGT
GCCGAACCTGTCATCGTCAAAGGCGATAGACCATTGCAATTGAACGTCTGGCATTCAATA
AGAGTCAGCAGGACCGATTCGAAGGTGACAATGGACGTCGACGATACAGGACCGTTCATA
ACTGATTCGGAAGAGCCTTGGTCGGCCGTGCTGGAACTCAACCAGCCAATGTACATTGGA
GGAGTTCCTGATATTGACCAACTACCAGCTGGACTTGCAGGATCCGATGGGTTCATCGGA
TGCGTGAGCACTCTGATCCTCGGCCACGATGAGAAGAATATCATGCTCGACAGCTTGGAA
CAATACGGCGTCGACGAATGTCGGTCTTGCACTCCCAACCTTTGCGTCAATGACGGAATC
TGTCAGGAGGCGCGTAATGAACGCGGCTACATGTGCATCTGCGCTCCTGGCTTCGCCGGC
TGGAATTGCGAGAGAACCGGGGAAGCTTGCAGAGCCGGCCTATGTGGACCTGGGAAATGC
ACCGAAACAGTGGACGGTTACAGGTGTGCTTGTCCCATGTCTCACACAGGCAAGAACTGC
GAGACGAAGCAACTGATCGCGTACCCAGCTTTCACGGGGAGCGCATTCCTAGCTATCAAC
GCCCCGCCGCCGTCCCGTTCCATGAAGATGTCGCTAAAGATCAGGGCAGCCACTCCAGTG
ACAGACGGCATCATCATGTACTGCGCCGAGTCGTCGCGAGGATACGGCGGCTTCACCTCA
CTGACCGTTCGAAATGGAAGACTTGAGTTCCGTTACGACCTTGGATCCGGAAGCACTCCC
GTGGTGCTTACAAGTGACAGGCCATTGCCCGCGAACCAATGGATCGACATTCAGATCGCC
CGCCTCGCGGATTCCGTCTCCATGAAGATCAACTTAGTACGCAGCTTCGAGAGACGTTTG
GATAGACCGGCTGAAAGCCTCCGGTTCGAGACTCCGATGTTCGTGGGCGGAGTCGACGAT
TCCACCGTGGTAGTGAACCCTAACGCCGGCGTCAGCGGCGGCTTCAGCGGATGCATTAAG
GATGTCGTGTTGAATAGCAACGCCGTCGACATAAACTCATCGATTAAGTCGTCGAACATT
CAAGAGTGCAACACGTACGACCGCGGCGATATTCAGGCGTCGGAGTCCTGCCAATGCGAA
AACGGAGGTTCCTGTTCGACTGAATCCACCAATTGCATATGCCCACCCGGCTATACGGGA
TCGTACTGCGAGACGCGCATCGCATCCTACCTGATGTCGCCACCTCCGCCGGTAAACCCT
TGCTCTCTGCACCCGTGTCGCAACGGAGGAACCTGCAAACCAGATCGCAACTCTTGGATG
AACCACACCTGCGACTGCCCCTTGGGTTATGCCGGAGCCTCGTGTCAGATGCCTCTCGAA
TTAGGCCAGAGCGTGGGCTTCAACGGCAACGGGTATGTAGAGTTGCCGGCCAGTTTGCTT
CGCTATGATGAACTGGCCTCGAACCCCGCTGTCATCGCCCTCGCTGTGCACACCACAAAC
GACGGAGTACTGGCCTACCAGAGGGAAGGACAAGCTCCGCCTAACGAAGGCGATTACTTC
TTATTGAGAATTGAAAGAGGTTTCGTCGTACTCGAATGGGACTTGGGCGGTGGTCTTTCT
TCCATAGTTGTCGATGTTCCTATTAACGACGGCGAGAGGCACCAGGTCGCCGCTCGTCTG
CACGAGGACGGACACGCCTGGCTCTCCGTCGACGGAGTTGACAAGAGCGCGCCGGCCACC
GGTATCTCCAACGTCATGAACGCTGACTCCAACATATACATCGGTGGAATACCAAGCTGG
TTGAACATCCACGGATATCCAGGCTTCATCGGTTGCATTGAGAATGTTGAGACAACGGAC
AGCCACCGAGGATTGAATTTGCGAGACACCGCTGTGGCTGGTCGAAACACGCAGCTATGC
AGAGACTCCTGATTTGAGTTCATCGAAACGAAAACTACGAAATAATTAAGTAAAAAATCT
CTACGCTTTCATAAAACTGGAATGCATCGTATATTTTAAATATTATAATCTCATGATTAC
GCAATTAGAGGATCTATTATCTTAATTTACGATTGGTCGATCGTCAGATCACTATCAACT
TACTACGATAGCAATAGTTGAGTTATCTTCAAAGTTTAGTATACAAGTTCGATAATAGGT
CCTCGGTTGTCATTTAAAAATAAATATTCGTTGTGGTTTAGTATATAGAGAAATAATTGA
CATTATATATTACCGTTGTATTTAGTATTAAGATTGATTCGATCACGACAATACGTCTAT
TATGTAGTCTATTAATTTTTTATTAAATTAAGTGTTACTTATAATCAATTTAACGTGGTT
GGACCTTCGTAATGGCTGCGTCGAGTTGCGGGGTGCTCGGATGAGGAGCGGATTTGGTGC
CATAAGAATTGAAAAGGAAATTTAAAAACTAAATAATATAATAATGTAGCTAGGAGCTTG
AATAATTGAAAATATTCTATTTTTTATTTTGTTTAAAGAAGTACTTTATCATTGTTTTCA
TTTCGGCTTGTTTATTAAGTTGTTTCTGTTTGTTCAGTTTAATTCCAAATTATGAATTTA
CGTATAATTTCAATGCACCCAGTGATAAGATTTGTAATGTGCCAAACGTGTTTGAAAGGA
ATTTGTTTTTTACCTATTTTTTCTTTTTTAGAGCACTGCCATTTTGTTTCGCTTTTATTC
TTTAGGTAGTTGCATTTCGCTTTTATTTAGAGCTATGTAATGTTTTTTTTTTTAACAAAC
ATGTTACGTTGCTTACGATTAATTAACACGACTAGTTATCGCGATGGCATTTAATGTTTT
CAATTTCGTTTTGTTTTTTTCCTTCACGTGTTCTACTCGTATATAAAAACCGTTTTAATA
ATTTTTTAATACTAAAATAATCGTGAATGTACTGAATAATGTCGTTTATCAAGAATCTTG
TATTCGTAATCTATGAAATTTCAAAATGAACGTTTTAAACGAACCTGTCTATATTGAATT
TTATCTTTATGTATCCGCTAAGTGAACAAATGCAAATTAACCATTAAGAAATGAAAATTA
TTGTCAAAATAAAAAAAAA
(10759 bp)

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