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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c13140_g1_i1
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		protein_transport_protein_Sec24C_isoform_X1_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:48.08 TPM:36.88
ORF EntryO_BomoASG2369_complete:A_BomoASG_c13140_g1_i1
Sequence
(Nucleotide)
GCGTTTTTAGTGTGACAACACTGCTAATACGTGGCCCCGACGTTTTAAGTGATTTGTGTG
TCTTGTTTACGTTTTTTATTGTGTAATTTCGTTTTTATATCTCTCAGAAGCCGTGATACG
GCTTACCATAAGATGATGAATCCACAATATCCACCTCCTGGGCAAAATAATAATGCTCCC
AACAACCCGATATATCCACCTAGCTCCCAAGAGTACAATGGAGTACAGAATGCTAACATC
TATAGTCAGATGCCGGCTGGGCCACAAAAGCAATTTGATCAGGACATGGCACAGAAAATG
CAGAACATGAACATAAATGGCTCACAAGGATTCAATATCCCTCCTACACAGCTACCTCCT
GGTCAAGCACCACCAAATTTTGGACCAGGGCAAGGTCAACGGCCAGCTCCAATGCCGATT
AGACCACCTGCGGGAGGACAATTCCCTCCAATGACAGGACAGAGACCTCCTTCTGCAACA
GGACAGGCACTAACAGCCCAAGAAGGATTTGAAACTCAGCGACCTCCAAGTCAGCCCATG
CCACCTATGAGTCAACCACAGGGTATATCTGGTCAAATGCCACCTCATTCTAAGGGTGGT
TTTCCATATCAACCTATACCGGTGCGGCCAGGAATGCCACCAAATCAACCTACAGCTGGA
ATGGTTGCTCAACCTGGAGCAGCCCCTCAGCCAGGTCCGGGAATGCAGGGCCCTCCACAA
TCTCAGTCAAGTTCTATACCAACAGGAATACCTCAGTCAAGAGCTGGCCCTATTCCTGGG
CAACCAGGCCTCAATCCACAGTCATTAGGCCCTCAATCAGGGCCTGGACAGGGAGCCCCA
CCTCACCCGGGCCAAATGCCACGGCAAGGGTTATCTCAGCCTGGTCAATCCAGCTTAGGA
CCCCAACATGGTCTCCCTCCGACAAGTCAAGGCCTACCTTTGCAACCAGGAATGTCTCCC
CAACCTCCACAACTTGGACCGGGTCTACAGCAGCAAACAGGACAGAGACAACCTCCACAT
ATTGGTCAACAAGGCACACCTACAAGTCAACCTAGCTTCCCACAACAACCTGGTCAAATA
CCTTCTCATCCAGGGCAAGCTGGATTCCTATCTCAACCTGGCCCGCCTGGTCTGCCAGCC
CAACCAGTCCAGGCTGGACAACCTCAACCTGGCCCACCTGGGCTACCAACACAAGGGCTT
CCATCGCAACCCAGCCACCCTGGACTCCCTCCACAACCATCACAAGGGCTTTTACCTCAG
CCCGGCCTTCCTCCGCAACCTGGTTTTCCTCAACAACCTGGTTTTGGGCCCCAAGGTCCA
TACCAACAGATGCCCGGTATGCCACACATGCCACCACCCTTGGCCCAGCAAAGACAGTTT
CCCAATGCTCCTGCTCAGCCTGGATATGGAGCGCCACCTGGGCCACCTACTAGTGCAGCC
TTTCCTGGCATGCCACCCCTTCCACCACAAGGCCATGGGCAACAATATCAAGGACAACCA
TCAGGCTACCCGCCACAGTACCAACCTCCATTCCCAGCACAACAGCCAAGCTACCCAGGT
CAGCAGTATCAACCACCACAGAAAACCCTAGATCCGGACCAAATGCCCAGTCCGATCGAG
GTGATGTTGGATGACCAACAGAACCGGGGTGGTGTCTTTGTTACGAATGGTAAAGGATTA
GTTCCGCCGCTGGTGACCACCGATTTCATCGTTGACGACAAAGGGAATGCCAGTCCCCGC
TACATTCGGAGTTCCATGTACACGGTGCCTGTGACCGCAGACCTGCTGAAGCAAACCGCC
ATGCCGTTCTGTTTGGTCGTGTCCCCGATGGCGGAGACGGTGGGGCAGGAGCTGGAGCCG
CCGCTGCTGGACTTCGCGGCGCTGACGGGGTCCCCCGGCATGGGCCCGGTGCGCTGCTGC
CGCTGCAAGGCCTACATGTGCCCCAACATGAAGTTCGTGGACGCCGGGAGACATTTCAAG
TGTGCCTTCTGCAAGGCGACTACTGAGGTGCCGATGGAGTACACTCAGTACGTGAACAGC
ATGCAGCAGTACGGGCGGGTGCCGGCGGAGATGGCGCTGGGGGCCTACGAGATAGTCGCC
ACCACCGAGTACTGCAGGAACAACACGCTGCCGAAGCCGCCGGCCACCGTGTTCGTGCTG
GACGTGTCGTACAACGCCGTCAAGAGCGGCCTCGTCGACGCGTTCTGCGAGAACATCCTC
GACATCATCCGGGAGCTGCCCAAGGACGAGCAAGGGAAGAGCTACACCCGCGTCGGCTTC
ATCACCTACAGCTCGACCGTTCACTTCTACAACATCAAGGGCAGCTTAGGCCAAGCCCAA
ATGCTGTCGGTGGGCGACGTGGGCGACATGTTCGTGCCCATCCTGGAGGGGTTCCTGGAG
AGGGTCGAGGACAGCGGCTCGGTGCTCGCCTCCCTGCTGGAGCAGATTCCCGCCATGTTC
AGAGAGAACAAGGAGACGGAGACTGTCATGCTGCCGGCCGTTCAGGCTGGTCTGGAAGCT
TTGAAAGCTGCCGACACCGCCGGTCAGCTGTTCGTGTTCCACACTACGCTGCCCACGTAC
AACGCGCCCGGGAAGCTCGTCAACCGCGAGGACAGGAAGCTTTTGGGAACCGACAAGGAA
AAGCAGATATTGGGTCCGCAGAACACCGCGTACAACGAGCTGGGCGCGGCGTGCTCGGCG
GCCGGCGTGGCCGTGCAGCTGTTCGCCTGCAACAACGCCTACATCGACGCCGCCACCGTG
GGGCAGCTGCCGCGCCTCACCGGCGGACAGCTCTACAAGTACACCTACTTCACGGCGGAG
TGCGACGGCGCGCGGCTGCTGCGGGACGTGCGGCGCGCGCTGCGACGTCCGGCCGCGCAC
GACGCCGTCATGCGACTGCGGACGTCCACCGGCGTGCGCCCCACCGACTTCTACGGGCAC
TTCTTCATGTCCAACACCACCGACGTGGAGCTCGCCGTCATGGACGCGGACAAGGCGGTC
GGCATCGAGGTGAAGCACGACGACAAGCTGACGGCGGAGGAGGGCGTGTACGTGCAGGCG
GCGCTGCTGTACACGCACCGCTCGGGCCAGCGCCGGCTGCGCGTGCTCAACCTGGCGCTC
AGCGTGGCGCACCAGCTCGCCGACGTCTACCGCAGCATGGAGCTCGACACCTGCATCAAC
TTCCTGACAGATCGGAAGAGCGTCGT
(3206 bp)

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