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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c13053_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX47_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:30.67 TPM:23.53
ORF EntryO_BomoASG2318_5prime_partial:A_BomoASG_c13053_g1_i1
Sequence
(Nucleotide)
CACATACGTCACATATTATATGTGATAGATTCAGAAATCAGAAATCAGAAATCAGCATAC
CCCTAATTCAAACACATGCTTTCAATATTCGCGTCTTTTTTGTATTCCCCAAAACAATGA
TAATTTAGAGAAAATGACTGCAGACAAGGAAAGCTATGGAGACGAAACCAACCAGGATAG
TGAGGTGGAACAAACTCCAACCGAAAATGTCAACGAAGATACTGAAGATGATAAAATAAC
ATTTAAGGATTTGGGAGTTGTAGACGTACTCTGCGAGGCTTGTGAAGAATTGAAATGGAA
GAAACCCTCTAAGATTCAAAAAGAAGCTATTCCCGTCGCGTTACTAGGCAAAGATATCAT
TGGTCTTGCCGAGACAGGTTCTGGTAAGACAGGTGCCTTTGCCCTGCCCATACTTCAAGC
ACTACTGGAGAACCCGCAGAGATATTTTGCACTTATACTCACACCAACAAGGGAACTGGC
ATTTCAGATATCAGAACAATTTGAAGCACTTGGTGCAAGCATAGGTGTAAAATGTGCAGT
AATAGTTGGTGGTATGGACATGGTGGCACAAGCACTAATGCTATCCAAGAAACCTCACAT
AATCATCGCCACTCCTGGAAGATTGGTTGACCACCTGGAGAATACCAAGGGATTTAATTT
AAGGCCTCTAAAATATTTAGTAATGGATGAAGCGGATAGAATTCTCAACATGGATTTCGA
AGTGGAAGTGGACAAGATTCTCCGTGTGATACCAAGAGAACGCCACACTTATCTCTTTTC
TGCAACAATGACGAAGAAAGTGCAGAAGCTCCAAAGGGCATCATTACAAGATCCTGTGAA
AGTGGAGGTGTCTACAAAGTACCAGACTGTTGATAAGCTTATGCAATCCTACATCTTCAT
ACCTGTTAAGTTTAAGGATGTATACCTAGTTCACATTCTCAACGAGATGGCTGGAAACTC
GTTTATCGTCTTCGTCTCGACGTGCGCCGGTGCGCTGCGCTGTGCATTATTGCTCAGAAA
CTTGGGTCTGGCCGCGGTACCGCTACACGGTCAGATGTCTCAGAATAAACGTCTCGCAGC
CCTGAACAAATTCAAGAGCAAATCCAGATCGGTGTTGATCTGTACTGACGTAGCATCCAG
AGGTCTGGACATTCCTCACGTGGACGTCGTGATAAACCTGGACATCCCGCTGCACAGCAA
GGACTACATCCACCGCGTGGGCCGCACCGCCCGCGCCGGTCGGGCCGGTAAAGCTATCAC
TTTTGTCACGCAGTACGACGTGGAGTTATACCAGCGAATTGAACAGTTGATCGGGAAACA
GCTGCCTTTATACAAGACGGAGGAGAGCGAGGTCATGGTGCTGCAGGAGAGGGTCGCTGA
GGCCCAACGTCTCACTAGAATCGAAATGAAAGAACTAGAAGACAAGAAGAGTACGAAGGG
TAAGAAGCGAGGTGCCGACTCTGACGACGACACAGAGGATGCGGTCGGAGTCCGCAGACG
AATCAAGGGGAAACCTAAACACGCTGGCAAGAAACGGAAACGACGAAATACAATTTTATA
(1560 bp)

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