SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12900_g1_i2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		protein_DEK_isoform_X3_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016568 P chromatin organization
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:52.24 TPM:40.07
ORF EntryO_BomoASG2227_complete:A_BomoASG_c12900_g1_i2
Sequence
(Nucleotide)
GCCGCTGCAAATCTGAAAACGAAACGTGCAAGTTTTTTTTTTTCTATGTTGTGCGTGCAT
TTGTGTTGTCCGGTGTTTGAAGACGCTTGGAATTCGCTTTCAATTTCTTCGTAGGAAAAA
TGTCGGGTGATACCGATAAAGCAAAAATCAGTGACAATCAGGATGAAGACAAGAAATCCA
GTACTGGCGATGGTCAAACAACTGAAGACGAGTCATCCCAGGACTCGAAGGGTGACGTAA
AGACGACAGCCAACGGTAAGGATGACGAGACCGGCGGTGATGACTCCAAAGATGAAAAGG
ATAAAACCGATAGTGATACTAAAAAGGAGGAGAATGGTGAGACACACGATGAAGATGAAA
AAGACGATGTGAAGAGTAATGATAAGGGCGCAAAGAAAGCGCCCCCTAAGAAGAAACCTA
AGAAAGAGGATACTGAGGAAGAAGACGAGGATGACGAAGAAGAGGAAGAGGAAGAGGAGG
AGGAGGAGCCAGAGGAAGGAGATGAAGATGATGAAAAGGAGGACAAGAAAACCAAGGATA
AAGTGAAGAAGCCGGCAAAAAAAGCAAAGGGCGATGACGATGAAGGTGATGATGATGAAG
GTGAAGAGGACGAAGAAGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGGAAGCTCCTAAAC
CCAAGCCCAAGAGAGAGCCTACGGAGCCGCCGGTACCGCTACCCGCTGGAAAAGGTATCC
CGCTCGGGCACATCAGCAATGTGGAAGTATCGTTGTCGCGATTCAAGACCCAAGATCAGA
AACTACTACATCAGTATTTGTATGGGCAACTTTGCCTGGATCGTAATGTTAAACGCAACA
TCAAGAAGTTCAAAGGCTACGAATGGGCAATCGGCTCGTCCGACTACAAGGCTAAACTGG
AGGAGACCACCAAGATGGAACCCAAACAGTTGCGTACAATGTGCGAAATGCTTGATTTGG
ATAAAAAAGGGTCGGCGTCGGAGCTGGCGGGGCGGCTGGTGGGGTTCCTGCAGCAGCCCA
CCGCCAACAGTCCGCACGCGCGCGGCGTGGCGCGGCCCCCGCCCGCCCCCACCTCCACGC
CCGGCGGCCGGCCCCGGAGGTCCGCCGCCGTCAAGGTGCATAACAGAGGTTACTCTGATG
AAGAATATGAAACTGATCCAGAACCGAAAGTCAAAGGGCCGAAGCCCACTAAAGAAGGTT
CCGAAGATTCAGACGGTTCATTCAACCCGAGTGGCTCGGAGGAGGCGGATTCGGACTTTG
ATCCTGAAGCCGGTGAGGGTGTCGCGAAGAAACGTGCGCCGCGGAGACGATCCGCCGGGA
AACCCACCAAACGGTCCTCCAAGAAGGGCAGCAGCAAGGGGAAGAAAGGAAAGCAGGCTA
AACCGAGTCGCGGCAGACGAGCAAAGTCCGAAAGCGACGAGGAAAGTGAAAAATCTGAGA
GTGAAAGCGACGCAGAGTCCGGTAGCGACGGAGAGGAATCAGATGAGCCTAAAGCGAAGC
GAGGACGGCCATCGGTGGTAGCTAAGGGACGCAAGGGTCCGGTCGCAAAGAATTCTAAAG
CAACGCCCGTAAAACGGAAAGCACCTACGCCACCTGCTAAAAAGAAGGCGGTAGCTGGTA
AAGCCGCAGCAGGTCGACCGGCCAAGAAGGGGAAGAAGGCTTCGTCCGACGAAGAGTCTG
GCGACGGAAGCGAGGAGGATGACGACGAGGAGGAGGCCAGCGACGACGAGAGCGGAGACG
ACTCGGACGCGCCGACCGACAAGAAGGCTAAACGACCGCCTACTGATGAAGAAATAAAGA
AGTACGTGAAGCAGATCCTGGAGGGCGCGAACCTCGAGCAGATCACTATGAAGACTGTTT
GCAAGCAGGTCTACAGCCACTACCCGGACTTTGACCTCGCGCACAAGAAGGACTTCATCA
AGGCCACGGTCAAGTCGTGTATTTAAGATGTTAGGAGTTAAGGGAGCAGTGTAGATGTCT
ACATAGTATACCTATAGTTTATAAAGGACATAGTTATATATTATTACAATAATAATATAT
TATGAAAATAAAAGTTTAATTAAAAATAATAATAAAAAAAAAAAAACAATAAAATGA
(2097 bp)

- SilkBase 1999-2023 -