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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c12900_g1_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		protein_DEK_isoform_X3_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0016568 P chromatin organization
GO:0019079 P viral genome replication
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:140.84 TPM:108.03
ORF EntryO_BomoASG2223_complete:A_BomoASG_c12900_g1_i1
Sequence
(Nucleotide)
GCCGCTGCAAATCTGAAAACGAAACGTGCAAGTTTTTTTTTTTCTATGTTGTGCGTGCAT
TTGTGTTGTCCGGTGTTTGAAGACGCTTGGAATTCGCTTTCAATTTCTTCGTAGGAAAAA
TGTCGGGTGATACCGATAAAGCAAAAATCAGTGACAATCAGGATGAAGACAAGAAATCCA
GTACTGGCGATGGTCAAACAACTGAAGACGAGTCATCCCAGGACTCGAAGGGTGAGTCGC
TGCGGTTTCAAGATTCTGAGGCCCAAGGTAACGCTGATGTAGATCAACCAGATGCAAAAG
AAGAGAATCTAGAAGGTGACGTAAAGACGACAGCCAACGGTAAGGATGACGAGACCGGCG
GTGATGACTCCAAAGATGAAAAGGATAAAACCGATAGTGATACTAAAAAGGAGGAGAATG
GTGAGACACACGATGAAGATGAAAAAGACGATGTGAAGAGTAATGATAAGGGCGCAAAGA
AAGCGCCCCCTAAGAAGAAACCTAAGAAAGAGGATACTGAGGAAGAAGACGAGGATGACG
AAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGCCAGAGGAAGGAGATGAAGATGATGAAA
AGGAGGACAAGAAAACCAAGGATAAAGTGAAGAAGCCGGCAAAAAAAGCAAAGGGCGATG
ACGATGAAGGTGATGATGATGAAGGTGAAGAGGACGAAGAAGAGGAGGAGGAAGAGGAAG
AAGAGGAGGAGGAAGCTCCTAAACCCAAGCCCAAGAGAGAGCCTACGGAGCCGCCGGTAC
CGCTACCCGCTGGAAAAGGTATCCCGCTCGGGCACATCAGCAATGTGGAAGTATCGTTGT
CGCGATTCAAGACCCAAGATCAGAAACTACTACATCAGTATTTGTATGGGCAACTTTGCC
TGGATCGTAATGTTAAACGCAACATCAAGAAGTTCAAAGGCTACGAATGGGCAATCGGCT
CGTCCGACTACAAGGCTAAACTGGAGGAGACCACCAAGATGGAACCCAAACAGTTGCGTA
CAATGTGCGAAATGCTTGATTTGGATAAAAAAGGGTCGGCGTCGGAGCTGGCGGGGCGGC
TGGTGGGGTTCCTGCAGCAGCCCACCGCCAACAGTCCGCACGCGCGCGGCGTGGCGCGGC
CCCCGCCCGCCCCCACCTCCACGCCCGGCGGCCGGCCCCGGAGGTCCGCCGCCGTCAAGG
TGCATAACAGAGGTTACTCTGATGAAGAATATGAAACTGATCCAGAACCGAAAGTCAAAG
GGCCGAAGCCCACTAAAGAAGGTTCCGAAGATTCAGACGGTTCATTCAACCCGAGTGGCT
CGGAGGAGGCGGATTCGGACTTTGATCCTGAAGCCGGTGAGGGTGTCGCGAAGAAACGTG
CGCCGCGGAGACGATCCGCCGGGAAACCCACCAAACGGTCCTCCAAGAAGGGCAGCAGCA
AGGGGAAGAAAGGAAAGCAGGCTAAACCGAGTCGCGGCAGACGAGCAAAGTCCGAAAGCG
ACGAGGAAAGTGAAAAATCTGAGAGTGAAAGCGACGCAGAGTCCGGTAGCGACGGAGAGG
AATCAGATGAGCCTAAAGCGAAGCGAGGACGGCCATCGGTGGTAGCTAAGGGACGCAAGG
GTCCGGTCGCAAAGAATTCTAAAGCAACGCCCGTAAAACGGAAAGCACCTACGCCACCTG
CTAAAAAGAAGGCGGTAGCTGGTAAAGCCGCAGCAGGTCGACCGGCCAAGAAGGGGAAGA
AGGCTTCGTCCGACGAAGAGTCTGGCGACGGAAGCGAGGAGGATGACGACGAGGAGGAGG
CCAGCGACGACGAGAGCGGAGACGACTCGGACGCGCCGACCGACAAGAAGGCTAAACGAC
CGCCTACTGATGAAGAAATAAAGAAGTACGTGAAGCAGATCCTGGAGGGCGCGAACCTCG
AGCAGATCACTATGAAGACTGTTTGCAAGCAGGTCTACAGCCACTACCCGGACTTTGACC
TCGCGCACAAGAAGGACTTCATCAAGGCCACGGTCAAGTCGTGTATTTAAGATGTTAGGA
GTTAAGGGAGCAGTGTAGATGTCTACATAGTATACCTATAGTTTATAAAGGACATAGTTA
TATATTATTACAATAATAATATATTATGAAAATAAAAGTTTAATTAAAAATAATAATAAA
AAAAAAAAAACAATAAAATGA
(2181 bp)

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