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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c5815_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		negative_elongation_factor_E_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:6.12 TPM:2.74
ORF EntryO_BomaMSG1374_internal:A_BomaMSG_c5815_g1_i1
Sequence
(Nucleotide)
AACAAATTTAAAAATGGTCTATTTACATTTTCCTTCGAACCTAACCGAGGAAGAACTAAT
GCTACAAGCTAAATACCAGAAACTAAAAAAGAAGAAGAAAGCTTTGCAAGCCCTTAAGGC
ACCAAAACCCGAACCAGAAAAGCCAATTTTACCAAAAAGGCCTACAGAAGCCAGAGATGC
CAGGGAAATAGCTAGAAAATTGCTGAAAAGTGGTGCTATTCAAGCTATTAAAAGTCCTCC
AACTCAGCCACAGAACACCACTTTCAAAAAACCACGTGCAGGTCGAGAAAGGAAATTAAG
TGGTTCTGCTGGAGTACCTGGAGGTGTTGCTTCATATCAACCATTCAGTGCTTCACAAGA
ACCTCCACCTCAAGAAGAGAAACAAACTCCAAGAGTTAAATATCTTTATGACTCTTTTGT
CACTGCCAGAGAAAAGGACGACAAAGGCTCACGCACTCCCAATCCAGGTGGCAGTACACC
GTCTCAATCAGATGGTCGCAGTTGTACTTTACAATTGGTCGGTCAACGGATATCTGAAGA
GATATTGAGGAGACGCCTGGCTACTTTTGAGCCCTTTGCATTCATGCCAAAAGATGACAA
GGCTTTCTTAACCTTCGATAGTCCTGATATTGCGTCGCACGCTTTGTCGGCTCTTGAAGG
CAATGAGGAGGGCTGGCGTATAAACATCGCGAGAAGACCTCCGCAGCAACAAGGGACTTG
GAGTGCGTCGTCTTCACCACGGAATCCACAACCGCCTCCCAAGGACTTGAAACGTAC
(777 bp)

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