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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c5142_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		heterogeneous_nuclear_ribonucleoprotein_L_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0010467 P gene expression
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0035770 C ribonucleoprotein granule
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045120 C pronucleus
GO:0070062 C extracellular exosome
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:4.25 TPM:1.90
ORF EntryO_BomaMSG1246_3prime_partial:A_BomaMSG_c5142_g1_i1
Sequence
(Nucleotide)
GAGCGATTTAATTTCCATTCATTCAATCAGTCTGGACGCGGCCACCCAAGGAGGAGGGTT
TGTCGTTTATAATTCTACCAAAACGGGTTTCGGTGTGATTAGTGTTTTGTTTTGTTGTGC
ATGATGGCTTACAACGGTAGTGGTGAAAAAAGACTACGTGCAGGTAGCGACCTGGATGTT
GAAAGGAGCAACGGCAATAATTACATGGCCGGCGAGCCATGCCGCAAACGAAAGCTACCG
GCGCGGCCGAACCACATACTGCTCTACACCATCATCAATCCAGCATATCCCATCACTGTG
GACGTAATACACACAATAAGCACCCCGCACGGACAAGTGCAAAGGATCGTCGTCTTCAAG
AAGAATGGCGTGCAGGCGATGGTTGAGTTTGAAAGCGTGGAATCAGCGACGAGAGCAAAG
GAAGCACTACACGGCTGCGACATATACTCGGGATGCTGCACGCTCAAAATTGAATTCGCA
AAGCCCGAAAAATTGAATGTCTTCAAAAACGACCAGGAGAGCTGGGACTACACATTATCC
GAGGACTTGCAGCCTGTACAGAGGAGCGCCCCGCTTCTGCAGTCACCGCAGTACACAGGT
GGACGACCC
(609 bp)

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