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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23265_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		spliceosomal_protein_on_the_X_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:6.32 TPM:2.82
ORF EntryO_BomaMSG14024_3prime_partial:A_BomaMSG_c23265_g1_i1
Sequence
(Nucleotide)
GTGAACTCCATTGAAAAATGTCAATGTCAAACCGAAGAAAACAAACGCTTCGCGGTAGTA
TATGAGCTGTCAAATCTTTTGAAAAAATGGCAGCGGGGCCTATTGCTGAAAGAAATCAAG
ATGCAACCATTTACGTTGGCGGTCTCGATGACAGGGTAACTGAGAGTTTGTTATGGGAGC
TCTTCGTGCAGTCGGGGCCTGTAGTAAATGTTCACATGCCCAAAGATAGAGTGACTCAGA
CACATCAGGGCTATGGATTTGTTGAATTTATGGGTGAAGAAGATGCTGACTATGCAATAA
AGGTCATGAACATGATAAAACTATATGGAAAGCCTGTAAGAGTGAACAAAGCATCAGCAC
ATCAGAAGAACTTGGATGTGGGAGCAAATGTGTTCATTGGAAACTTAGATCCTGAAGTAG
ATGAAAAGTTATTATATGACACATTCTCTGCATTTGGAGTTATATTACAGACACCTAAGG
TAATGAGAGATCCTGAAACAGGAAATTCCAAAGCTTTTGCTTTTATTAACTTTGCATCAT
TTGAAGCCTCGGATGCAGCAATTGAAGCAATGAATAACCAGTATCTATGTAACAGGCCGA
TATCAGTTTCATATGCATTTAAGAAGGATGTGAAAGGGGAGAGGCACGGATCAGCAGCAG
AGAGATTACTTGCTGCACAAAATCCACTATCGCATGCGGACAGACCTCACCAGCTGTTTG
CCGATGCACCACCTACGTTGATGGGGCCTGTGCTAATGGCACCACCGCCGCCGCCCACAC
CATCCCCTATGCCACCACAAGGACCTCCAATGAATGCGCGACCACCACCACCATTGCCTA
TGTCAGCGCCGCCGCCACCGCCATCTTCGATGCCTCCTCCCGGTCCACCACCGCCTCCAG
GCCCTCCACCACCACCTCCACCATTCCATCATTTCCCGCCTCCGCCATTCGGTCCGCCAG
GGTTTGGACCACCACCCCCACCTGGTGCTCGTCCTCCACCACCATGGAGACCACCACCTC
CATCATTCAGGCCGCAGTTCCCTCCTCGTGGGCCTCCGCCGTTTGGGCATCCCCCGTTTC
CGCCGCATCCACCTGAAC
(1098 bp)

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