SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23218_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_NRDP1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:6.47 TPM:2.89
ORF EntryO_BomaMSG13913_complete:A_BomaMSG_c23218_g1_i3
Sequence
(Nucleotide)
GTACAGTAAACCTGAGTAAACCAAATCTATACGTCTGACTGTAAATAATTAGTTTATTTT
CAACTTATCTGAACTCAAACCTTGTTTTTTACTATAGTATGATCATAAAAAGTTAACTTT
AAGATACCAAAATCTTACTAATGTATATTTTGTGATAAATAATAATTATGGGCTTTGAAA
TCAAAAGGTTTCAAGGTGACGTCGATGAGGAGCTTATTTGTCCTATTTGTTCCGGAGTCC
TCGAAGACCCGTTACAGGCGCCTGCTTGTGAGCACGCGTTTTGTCGAGCTTGTATTACGG
AGTGGATCAGTAGACAGCCTACCTGTCCTGTAGACCGGCAAACGGTAACCGCGAGTCAGC
TAAGGCCAGTTCCAAGGATACTGCGCAACCTTCTGTCCAGATTATGCACAAGTTGCGACA
ATGCTCCACATGGCTGTAATGCCATTTTAAAACTGGACTCTCTACCTAATCATTTAGTTG
AATGTGAATTTAATCCTAAACGACCAATACCTTGTGAGGCAGGATGTGGACTGGTGATAC
CAAAAGATGAACTAGCCCAACATAATTGTGTACGTGAGCTTAGAGCACTGATAGCCACTC
AGCAGGGGAAGCTGAATGATTACCAGCAAGAACTGGCTGAACAGAGGCTCGTTATTAATG
AGCACAAACGAGAATTGGCATTATTAAAGGAGTTCATGAGAGCGATGCGCGTGTCGAATC
CAACGATGCGTGCATTGGCGGACCAGATGGAGCGCGAGGAGGTGGTGCGCTGGGCCAACT
CACTGGCCAGGGCGAGGGTCACCAGGTGGGGTGGCATGATCTCTACACCAGATGATGTTC
TGCAGATGATGATCAAACGAAGTTTATCGGAATCCGGCTGTCCCCCGCACATCATAGACG
ATCTAATGGAAAATTGTCACGAGAGGCGGTGGCCGCCAGGACTGTCGTCACTTGAAACTA
GACAAAATAATAGAAGGCTATACGAAAAGTATGTTTGCAAGAGGGTGCCAGGCAAACAGG
CAGTGCTGGTTCTTCATTGCGACAACACACACGTCGACGAGCACATGATGGTGGAGCCGG
GGCTGGTGATGATATTCGCGCACGGAATCGAATAGCGGACTCTGAGGCGATGCGTCGTGA
CGTCACGGCGCCCGCTCTACTGTACAGTGACCTTTTAATGAGTGTTCTGAATGTTGCTTA
CGCATAGGTCAATTTATTCAAGCGTGGTAAAAGTCGTTAATTTTGGTGCGGTGCAATTGC
AATGAGTTCAGTGTGCTCAGTGCGAGTTTCTTAACGTTCTCG
(1302 bp)

- SilkBase 1999-2023 -