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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23218_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_NRDP1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:0.49 TPM:0.22
ORF EntryO_BomaMSG13912_complete:A_BomaMSG_c23218_g1_i2
Sequence
(Nucleotide)
GTACAGTAAACCTGAGTAAACCAAATCTATACGTCTGACTGTAAATAATTAGTTTATTTT
CAACTTATCTGAACTCAAACCTTGTTTTTTACTATAGTATGATCATAAAAAGTTAACTTT
AAGATACCAAAATCTTACTAATGTATATTTTGTGATAAATAATAATTATGGGCTTTGAAA
TCAAAAGGTTTCAAGGTGACGTCGATGAGGAGCTTATTTGTCCTATTTGTTCCGGAGTCC
TCGAAGACCCGTTACAGGCGCCTGCTTGTGAGCACGCGTTTTGTCGAGCTTGTATTACGG
AGTGGATCAGTAGACAGCCTACCTGTCCTGTAGACCGGCAAACGGTAACCGCGAGTCAGC
TAAGGCCAGTTCCAAGGATACTGCGCAACCTTCTGTCCAGATTATGCACAAGTTGCGACA
ATGCTCCACATGGCTGTAATGCCATTTTAAAACTGGACTCTCTACCTAATCATTTAGTTG
AATGATGTGGACTGGTGATACCAAAAGATGAACTAGCCCAACATAATTGTGTACGTGAGC
TTAGAGCACTGATAGCCACTCAGCAGGGGAAGCTGAATGATTACCAGCAAGAACTGGCTG
AACAGAGGCTCGTTATTAATGAGCACAAACGAGAATTGGCATTATTAAAGGAGTTCATGA
GAGCGATGCGCGTGTCGAATCCAACGATGCGTGCATTGGCGGACCAGATGGAGCGCGAGG
AGGTGGTGCGCTGGGCCAACTCACTGGCCAGGGCGAGGGTCACCAGGTGGGGTGGCATGA
TCTCTACACCAGATGATGTTCTGCAGATGATGATCAAACGAAGTTTATCGGAATCCGGCT
GTCCCCCGCACATCATAGACGATCTAATGGAAAATTGTCACGAGAGGCGGTGGCCGCCAG
GACTGTCGTCACTTGAAACTAGACAAAATAATAGAAGGCTATACGAAAAGTATGTTTGCA
AGAGGGTGCCAGGCAAACAGGCAGTGCTGGTTCTTCATTGCGACAACACACACGTCGACG
AGCACATGATGGTGGAGCCGGGGCTGGTGATGATATTCGCGCACGGAATCGAATAGCGGA
CTCTGAGGCGATGCGTCGTGACGTCACGGCGCCCGCTCTACTGTACAGTGACCTTTTAAT
GAGTGTTCTGAATGTTGCTTACGCATAGGTCAATTTATTCAAGCGTGGTAAAAGTCGTTA
ATTTTGGTGCGGTGCAATTGCAATGAGTTCAGTGTGCTCAGTGCGAGTTTCTTAACGTTC
TCG
(1263 bp)

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