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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23216_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		TAF5-like_RNA_polymerase_II_p300/CBP-associated_factor-associated_factor_65_kDa_subunit_5L_[Bombyx_mori]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0043966 P histone H3 acetylation
Transcript
Level		FPKM:1.05 TPM:0.47
ORF EntryO_BomaMSG13906_3prime_partial:A_BomaMSG_c23216_g1_i3
Sequence
(Nucleotide)
TTATAAGTAGTGGCCGTGTAAAACTGTTGATTTTAATATATTATGTCCACCAAAGAGTAT
AAATTAAGTTCAGTGCTCAGATAAAATGAATGTGTGATAAAATCAAACAAGTGAGACATC
CCAAAACATTCTCTTTTATTTTATTAAAAGTATTCAATGATAATGTCATTAATAAAGAAG
ACAAGAAACGATGCAATTAAAGCTGCGGTGGCTTCTTATCTAGAAAGGCGAAACTATCCC
GATACTGAATATTACAGTAACAATAACCCAAATTGCCAGAGTGCTGAGCAAATGGCAGTT
TCCACTATTGTACAGTCTGAAGCAAGTCGTGCAAATTCTATCTTGTTTTCATGTATCAAC
AATGATTCCTCTCAATACGATATACAATACACCAGGTCATGTAAATATGATATTTACTTA
TCACAAGATGCTTTAAATATGTTGAAAGCATATTTGGCCAAACATGGACATGTATTAATA
ATACAAGTTTTGCAAACATGGTTTCATATTGATATAAATAGTGATAATAATAAAAAAAAT
TCTGAAGACGAAGAAGAAATGGAGTCTGATATTACAGAAAATATAATTTTTTCTGAAGAA
CGAGTCATAGAAGCAAACGACCTGTTTTCTAAATGTAATGGCCATGCTGAATATCAAACT
GTTGATAAGGAGTTGCGTGATCTCCAAGATGCAATCAAAGGAGTTAGAGACTCAACGGCT
CCGTTAAAATTGTACAAAATATCAGCACCGGATACGCATTTAATATGTGCAAAAACAGAT
CCTAGCTGTAACATGCTGTGCGGTGGCTTCATTAATTCTGAAGTCAGAATCTGGGATCTT
GGCCAAAACAATATGCAAAAAAGGATCAATCATAACATATCAAAAATTGAATTAGCTTGC
AACATGCCACCAGAATCTTCAAACGATCATGATACATTACAAATTGGCGCCGGATTGCCC
CTGAGAGGCCACTCAGGCCCAGTACAAGCTGTGACTATTATGCCCAGAGAAGAATTAATA
CTCTCAGCATCACACGATAACACAATGAGAGCTTGGAGACTGTCTGATTATTCATGTGCT
GCAATTTACAGAGGACACAATTATCCTATATGGTGTATGGACATATCAAGAAGTGGCTTA
TTTATAGTAACGGGATCTCATGACAGAACAGCTAAGCTTTGGTCTTTGAATAGAACGTTC
CCAGTGAGAGTGTTTGTCGGTCACATGTCTGATGTCTCTTGTGTGAAGTTCCACCAGATC
GGAAGAGCG
(1269 bp)

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