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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23189_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		puff-specific_protein_Bx42_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000790 C chromatin
GO:0000974 C Prp19 complex
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0035214 P eye-antennal disc development
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:10.10 TPM:4.51
ORF EntryO_BomaMSG13837_5prime_partial:A_BomaMSG_c23189_g1_i1
Sequence
(Nucleotide)
CCGCGCCCGTGCTGCACTCCCCCCCGCGCCGCGTGTCCGTGCGCCAGCAGAGGGACTGGA
AGGTGCCGCCCTGTGTCTCGCACTGGAAGAACGCTAAAGGATACACGATCCCGCTGGACA
AGCGTCTCGCGGCCGACGGCCGGGGTCTGCAACAAGTCCACATCAACGAGAACTTCTCCA
AGCTGGCTGAAGCACTATACATTGCCGACAGGAAGGCAAGAGAGGCCGTGGAAGCCAGGG
CTCAGCTTGAGAGGAGATTGGCGCAAAGAGAGAAAGAGAAGAAGGAAGAACATTTAAGGA
TGTTGGCGCAAAGAGCCAGGGATCACAGGGCTGGTATTCGAGCACCAGAAGAGGATGTGG
AACAGCCCGAGATAGATGAGAGCGGTCTCAGTGTGGCGGAGAGGGACAAGCTGAGGGCTG
AGAGACACAAAGAGAGGCAACGCGAAAGAAACATGGCCCGAGCAGCACCGGACAAAAGGT
CCAAATTCGCGAAAGAGCGAGAACGCGACATCTCGGAGCAGATCGCGCTGGGGCTGCCGG
CCAAGACCAACCAGGGCGGCGAGGCCATGTTCGACCAGCGACTCTTCAACAACAGCAAGG
GAATTGACAGCGGCTACGGAGAGGACGACGCGTACAACGTGTACGACAAGCCGTGGCGGA
GCCGTGGCGG
(670 bp)

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