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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23178_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR3_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:6.70 TPM:3.00
ORF EntryO_BomaMSG13819_3prime_partial:A_BomaMSG_c23178_g1_i1
Sequence
(Nucleotide)
CCGATCTGAGTTGTTTCTGAATTGCATATTTTCAACCAAACGAAGGGAATTAATATTTTT
CTTTCTTTCATCATTCAGTTTCATTTCATATTAAGTCGCGCAAACGTTTCTCTTTCGTTC
TTTAAAGTGTTTCTTAAACGAAAGCATGGTGAACCGTGACTTCGTAACCGAGTACAGTTC
ATTGCCTTATGTAAAACTTGAAATGGCTTTTCTTCCTTGAGTGACCGAATTAAATAGTGA
CTTATGTGTTTCATGTGATCTCTATTGGTTTGTGAAGGGGTCTAAGTGTTACAATGGCTA
ATTCAACGGCTCAAGTGTTAATGAAGAAGGGTAAAAGGGGGGCAGCCGCTTACATACATG
CGGACTGCTCCAGCGGATCACCACAGCACTTGGGGCCACTTCTAGACGTTCTGCTGAACC
CTAGCAAGGCTATAGACGAGTGGGAGACCATTGACTGGTGTCGGTGGCTGCTGGCTGGAG
GTAGAACACCAGATGAATTCGCTGCAGTCGTGCGAAGCTACGACAAACATGACAAGTGCG
GCCTAGTTTGGATACCGCGCGTGGTCGCCTACCGCTGCCGGACGTGCGGTATATCGCCCT
GCATGTCCATATGCAGAGAATGCTTCCACCGAGGCGATCACTCCACGCACGACTTCAACA
TGTTTCTATCGCAGGCCGGTGGTGCCTGCGACTGTGGTGACAAATCCGTCATGAAGGAAG
ATGGATTCTGCAGTAACCACGGTAATAAATGTCCTCGGCCCGGCACCGTTCCCGCGGAAC
TGATGTGTGTTGCTGAAGCGATGATGCCGCGGCTCATACTACGGCTGCTCCAGCACTTCA
GGGAGAACAGCGGAAGCCAAACTAATTCAGACCGCTGTCGTATTGCGGTTCAAGAGTGCG
AGGGCTACGTTCAGATGTTGATGGAGTTCAATAACATGGGTGACCTCATGCGGTCGGCCA
TGACTAAAGCGCTTATTAACCCACAGATGTACAGGAATCTTGTGGTTCCACCATTCCCGG
GCACGGAGTACGGGGCGTACATGGCGGAGTCACACCACATGTACGAGAGGGCGTTAGATC
TGTTCCCAGCACCGGAGCCGCCTGACGAGTACTGCCACCTGCCGGCGCTCGCGCCTCGAC
TGACGCACAACACGCTGTTGGAAGAATTCATATTCTGGACTTTCAAATACGAGTTTCCGC
AGAACGTGGTCTGCTTCTTGCTGAATATGTTGCCCGACCAGGACTACAAGGAGCACCTGA
CGCGCACGTTCGTGCTGCACTACGGGCGCATCCCGCTGGTGCTGGAGGCCGCCGCCGACC
CCGAC
(1325 bp)

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