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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23154_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		splicing_factor_3B_subunit_2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:3.72 TPM:1.66
ORF EntryO_BomaMSG13767_5prime_partial:A_BomaMSG_c23154_g1_i1
Sequence
(Nucleotide)
AACAGAAACGCAATGAAGAGTCTAAGACAAAGAACAACGCACAAGAAGAAAAGAGATCCA
GTGACAAAGAAAATGAAAAAGAAGCAGATATTGAATACGTGCAAGAAAACATACAGTTTC
ATGAAATGGAACCAATGTACCGTCAGTTCCATCGGATACTGGAAGCATTTAAAATTTCGG
AGAAAAAGGAAGAGACGATCAAAGATGAGGGTATGGATGCTCCAAAACCAACAAAACATC
AGGATAAAGTGCAGGACCAGTTCGCAGCGGATGATGAGGCAGCTGAGAAAAACGCAGCCG
ACGAAAAGGAGCGCCTATCAAAACGCAAACTAAAAAAATTGTCGCGTTTGTCAGTGGCCG
AACTGAAGCAGCTAGTGGCTCGGCCCGACGTCGTGGAAATGTACGATGTGACCGCGCGGG
ATCCCAAACTACTGGTCCAGCTAAAGGCACACAGGAACACTGTCCAAGTACCCAGACATT
GGTGTTACAAGAGGAAGTACTTGCAAGGAAAACGCGGTATAGAAAAACCTCCCTTCGATC
TACCGGACTTTATAAAGAAGACAGGAATCATGGAAATGAGAGCATCGCTGCAGGACAAAG
AAGAGACTAAAACCCTTAAAGCGAAGATGAGGGAACGTTCTAGACCGAAATTGGGCAAGA
TCGATATTGACTACCAGAAATTGCATGATGCCTTTTTCAAATGGCAAACAAAACCGCGTA
TGACAATCCACGGAGATCTGTACTACGAAGGCAAGGAGTTCGAGACTCGTCTGCGCGAGA
AGAAGCCCGGAGATCTGTCCGAAGAACTGAGAACTGCTCTCGGTATGCCCGTCGGGCCCG
GCTCACAGAAGGTACCACCGCCGTGGTTGATCGCGCAGCAGCGGTACGGGCCGCCGCCCT
CGTACCCGAACCTCAAGATCCCCGGCCTCAACGCGCCCATACCCGAGGGGTGCGCCTTCG
GCTACCACGCCGGGGGGTGGGGCAAACCGCCCGTCGACGAAATGGGAAAACCGCTCTACG
GAGATGTCTTCGGACATCAGACGAGTGGACAAGATGACGGCGAAGACGTGGACATCGACA
GGACAATGTGGGAGATCGGAAGAGCGTC
(1108 bp)

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