SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23123_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_mRNA_turnover_protein_4_homolog_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000027 P ribosomal large subunit assembly
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0022625 C cytosolic large ribosomal subunit
GO:0030687 C preribosome, large subunit precursor
GO:0031965 C nuclear membrane
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0070180 F large ribosomal subunit rRNA binding
Transcript
Level		FPKM:6.68 TPM:2.99
ORF EntryO_BomaMSG13700_complete:A_BomaMSG_c23123_g1_i1
Sequence
(Nucleotide)
CGATCTGGCGTATCATGCTTGTAAATCATTACGAACTGTGATCACGAATATTAATTTACA
ACAAATCAACAAATCCAGTGCACGTGATTTTTGAAATAGCAGAACTAATTAAATTGTAAA
TTTTGTCTTTTTCCTTATTAAAATAATAAAACAAATATGCCGAAATCAAAAAGGGATAAG
AAAGTATCACTTACAAAAACCAACAAAAAAGGTTTAGTACACAAACAAAAAGTCATAGAA
GAAATAAGAAATTCACTGAGCAAATATGAACACATATTTTTGTTTACCATCAATAACATG
AGAAATACAAAATTAAAGGACCTACGTAATGATTGGAAGGATTCCAGATTCTTTTTTGGA
AAAAATAAAGTAATGGCTATTGCTCTTGGTAAGACCAAAAGTGATGAAATAGAAGAGCAA
CTAAATCTGTTATCAAAAAAATTAAAAGGTCAGTGTGGATTGCTAATGACAAATAGAGAT
GTGCCTGATGTACTGAACTGGTTTAAAAGCTATCAAGCATCAGAATATGCAAGAGCTGGC
TTCGTTGCAACAAAAGATGTTTTATTACCCAGAGGTCCTCTAGCAGATTTTTCACACACT
ATTGAGCCACATTTAAGACGTTTGGGCTTACCTACATCTCTAGAAAAAGGTGTTATCAAT
CTAATAAAAGAATATCAGGTTTGCAAGAAAGGTGCTCCACTGACCCCGGAACAAGCAAGT
ATATTAAAATTGATAGGCATAGAAATGGCAGATTTTAAGTTAGTGATTAAATGTCACTGG
ACAAAAGGTAAAGGTATCCATATAGACAATGATTCTCCAAGTGATGAAGAAGAGGCAGAG
AATGATGATCAAGAAAATGTACTTGTAGACGAAATAATGGAAGAGACATAGCTATTTTAT
TTAATCACAATAAATTATGATAAGCATTAAAAAAAA
(936 bp)

- SilkBase 1999-2023 -