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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23113_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		interleukin_enhancer_binding_factor_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.91 TPM:4.43
ORF EntryO_BomaMSG13676_complete:A_BomaMSG_c23113_g1_i2
Sequence
(Nucleotide)
CTGCCATATTGGAAATTTGTTATGATTTGACCGATTGAGACCGCAGAAAGTGTCCGATTA
ATACAATTCGAACACTATATAAGCTCGCGCGTAAAAATAATTAAAGAAAAATTAGTGAAA
ACACAACTTCTATGTCATTAACATTCCAAGTGCAAAACAAAGTGAAAACGTTAACCTAAA
GTAAATTGTTTTTCCTGAAATGGTGCGCGGCATCGGTCGTGGTGGACGCGGTATCCCCGG
CCGGGGCGGGATGGGGCGTCCACCCTTCAACAGACCCCGAGTCTTGATGCTTCGTCCGCC
CTTCGACCTTTTATTAGCAGAACCCGCTTTTCCTAGATGCAAACCGGCTCCCGACGACTC
CGTGCTCACTCAGGCCCTTCTAAAGAGGCACACGGAGCTATGTCCGTCACCTACCGATCA
AGCAGCTGTTTTGAGCCTCGTCACGAAACTGCAGACAGTATTGGACAATATTGTTGTGGC
TCCGGGAGAATTTGCAGCCTGCCAACTAGAAGAAGTGCGGCAAGTTGGGTCCTACAAGAA
GGGGACAATGATGGCCGGGAAGAACGTTGCTGATATCGTGGTCATCATGAAAACCTTGCC
AACGAAAGAGGCTGTCGAGGGACTCTCCAATAAGGTTAACGAGGAGGTGAACAAGCTGAT
GAAGGCTGAAGGCAGCGGTGCAGTGGTGAGCGCGTGTCACGAGCGCGGCTTCACTGTCAC
CGGGACCTCCGCAGCCGTCAGGGTCCTCATCACAACACTGCATCAGAACTTAAGGAAGAT
AGAGCCTGATGTACATCTAGACTATAAAGTGATAAGCAGTCATCTAGCAGCGATAAGACA
CAGTCGCTGGTTTGAAGAGAACGCCCATCATTCATCAATTAAAGTATTGATCCGTCTTCT
CCGGGACATGTGCTCTCGGCACTCCGGACTCGAACCCCTGACGCCGTGGATGATAGATCT
GCTCGCGCACCACTGCATCATGAACAACCCTCAGCGTCAGGCCTTACCCATCAACGTGGC
ATTCCGCCGCGCGTTGTCCCTGATGGCGGGCGGGTTGTTCCTGCCGGGCTGCGCGGGGCT
GCCGGACCCGTGCGAGGCGGCGCACTCCCGCGCACACACCGCGCTCGACCTCGCCGCGCA
GGACCTCGCCGCCGCCACCGCGCAGACGTTGCTGCGCGTGGTGGCGCGCGGGGGTCACCT
GTACGTCCTGGGCTTGCAGCCGTTCGAGGGCGGCAAGGACATATCCCTGGAGATCACAGT
GTGGGACGGCGTGGTGGTCTCCCCGCTGGCGCCCGCCTACAACGACTCCCCGGAGCCCAT
GGACACGGACGACAAAGAAGAGTCACAAGACAGTGTCGCGGCTTAAGATCTAACTTGAGA
AATTACTTATAAGACTTTGATAAAATTAATAAAGATTTCTTTATAAAAAAAAAA
(1434 bp)

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