SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23102_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		eukaryotic_peptide_chain_release_factor_subunit_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0003747 F translation release factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006415 P translational termination
GO:0006605 P protein targeting
GO:0007224 P smoothened signaling pathway
GO:0008079 F translation termination factor activity
GO:0016149 F translation release factor activity, codon specific
GO:0018444 C translation release factor complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
Transcript
Level		FPKM:122.22 TPM:54.62
ORF EntryO_BomaMSG13647_complete:A_BomaMSG_c23102_g1_i1
Sequence
(Nucleotide)
CGGACGGCGAGGCGTTCGTTCGATTGGTTGTTCAACGTCATCTTTTATTCCTGTAATGTC
TGAATTTTGTGTTCCACATGCTTAGGGGTAACCGAAATAAGAAAAAATCCAAGAATCCCC
GCACAAGAAGAAAAGTCCGAGCAACCGCAGACGTAAATGTAAACTAGAAAGTGTGATCGG
AGTCGCGAGGTGTCTCGTCCGTCCGGTTCAAACTAGATTAGGGCAGTTTGAAACTGGAAT
TCGGGCTCCCTTTCCATAGTATTCGTTTATTTAAAGTTTTGGTGTTGTGCAAAGACATTA
TTTTAGTTATTTATACAAATATAGTGTTTGTGGTTAATTAGTTAAATAAAAAGCGAAACA
AAATGTCTGAAGAATCGTCGGCCGATCGAAATGTCGAAATATGGAAGATAAAGAAACTTA
TAAAGAGTTTGGAAATGGCCAGAGGAAATGGAACATCGATGATATCCCTGATCATTCCAC
CTAAGGATCAAATCTCGAGAGTATCAAAGATGTTGGCTGATGAATTTGGTACAGCTTCCA
ATATCAAGTCACGTGTGAATCGTCTCTCAGTGCTTGGCGCAATTACTTCTGTACAGCACC
GACTCAAGCTGTATACTAAAGTGCCACCAAACGGCCTAGTTATATACTGTGGTACTATCG
TGACAGAAGAAGGTAAGGAGAAGAAAGTGAACATTGATTTTGAGCCGTTCAAGCCTATCA
ACACATCTCTTTATCTTTGCGACAACAAGTTCCACACCGAGGCTCTAACGGCACTGCTGG
CTGATGATAACAAGTTTGGTTTCATTGTTATGGATGGTAACGGTGCATTATTCGGTACCC
TTCAAGGAAACACTAGAGAGGTACTCCACAAGTTTACTGTCGATCTCCCTAAGAAGCACG
GTCGCGGTGGTCAGTCAGCGCTGCGTTTCGCTCGTCTCCGTATGGAGAAACGTCACAATT
ACGTCCGTAAGGTTGCCGAGGTAGCCACCCAGCTGTTCATCAGTGCTGACCGGCCGAACG
TTGCTGGCCTCATCCTTGCGGGTTCTGCTGATTTTAAGACTGAACTGTCCCAGTCCGATA
TGTTTGATCCGCGTCTCCAAGCCAAGATCATAAAACTGGTGGACGTATCATATGGAGGCG
AAAACGGTTTCAATCAGGCTATAGAGCTGGCTGCGGAATCCTTGCAGAATGTCAAGTTTA
TACAGGAGAAGAAACTAATTGGACGCTACTTTGATGAGATCTCACAGGACACAGGAAAGT
ATTGCTTCGGTGTCGACGATACACTGCGCGCTCTCGAACTCGGATCCGTCGAGACGTTGA
TCTGCTGGGAGAACCTCGACATACAAAGATACGTATTGAAGTCGCATGCCACCAACCAGG
AAACAATTCTCCACCTGACACCTGAACAAGAGAAGGACAAATCACATTTCACCGACAAAG
AGAGCGGAGTGGAGCTGGAGCTTGTGGAGTGCCAGCCGCTGTTGGAGTGGCTGGCCAACA
ACTACAAGTCGTTTGGTGCCACCTTAGAGATCATCACGGACAAGAGCCAGGAGGGAAGCC
AGTTCGTTCGCGGCTTCGGAGGGATCGGCGGTCTCCTCCGTTACAAAGTGGACTTCCAAT
CGATGCAGCTCGACGACGAGGAAATCGACAATCTATACGACATCGACGACTATTAGCTGG
CAACACTGAAGAAACGAGACAAATGCACGCGTCTTCAAAAGCGCCACTCCATTGCTGTAC
CGTGTTGCTTTTGTCTAATCTGACGTGGCCCAACAGAAAATGCCTCTATCCAAAATAGTG
TGTATGTGTTCGGAATGAAAATGGATCGTACAGAGATTATCAAATAAGTTTTCATTTTTT
TTAATGAATTGTGATCTTTGATAGGCTGAGTGTTTTCTGTTGGATACCGTCCCGTTTTAT
GATGTTGTAAACGGAAATTTGTTATGAAATAAACGATGCGCAATCGAGAAGCAGTTACTA
TCTCACCTGCAATGTTTTAGTGTACACAAAAACCCTGTAAGCTTTGGAGAATAATTATTT
TTAATACCGGACGGACAATATCAATTTCAAGGTTTGCGCTAAGAGGGCTATTAAGTAAAG
CTAGGATGCTCTTGGTAACAGGAGCCGAGCTGTCCTCAATCTTGAGGTTTTGAAAGAGTC
AACATCCTAAAGAAACTGTTATATATGGATGGTTCGCGGCAGAAATAGGTAGGGTTCTGT
TAATAACTTTTGCAGACTCAAAATGCGTTTTAAGACCAGTAAGTTTTGAGTTGTTTATCC
TAAAACTTGAGGACTTAATATAATGGAGCTTCGTAATACCATTAGGCGAAATAAAAACTT
AATTGGGCTATTCTATCGTATTGAGATATTACCCATAGATATTTTATAAAGTCTGGCATT
AGGCTGCTCCGTGATAAAGCAGAGTTTTAGCAGGGTTTAGAGATGAACGACTAGTGTTTT
GTTTGGGTGCACTTTTGAGATTGGCAATGGCGTTAAATTGTTGGGGTTGTCCTGCGTATC
GACAGGGGACCCTACAATGGTGCCCTTTCGTTTGCAGATGACTGCCCCCTATTTAGAAGG
AATGGAGCACGTTATGTCGCAACGCAGTAATGAAAATCGACCATTTGAAATATTAATGTA
AATTATTGAAATGTTACGAAGAAGGTCGGTAGTTACATGAAAATCTTTCAAAGCTAAGAA
AATTAGGAGGTAGGGAATGTCGCGGGGAATCAACTATTTATTTTTTGTGTATTTTACTAT
TTGGCAACGTTCTCGTCTTTGTGTGTACTAGAATAATGCGGGTTACCCATCAAAAATGGT
GCACAATGAAATTGTAAAGTCGCATTGGAGAATAAAAATCAACAAAATTGGTTCTGTTTG
AAAAAATATTAATAAATACAAATTGGAGATTGTGGTGCCTTGTCTCAAATCGGCCCAAAA
TCGTCCATCACAGATTACTTGTTGAAAGAACTCCCTATCTATATATTTATAAATAAATTT
TGTGTTTCGATAGAATAATGTACTACTAAACTGCTAAAGAAATAAAGAAATTTCAGAAAA
AAAAAAAAA
(3069 bp)

- SilkBase 1999-2023 -