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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23080_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_isoform_X8_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:0.83 TPM:0.37
ORF EntryO_BomaMSG13606_internal:A_BomaMSG_c23080_g1_i2
Sequence
(Nucleotide)
TGCTCTTCCGATCTGGAGGAACTACCTATTTCTACTCCACCAATTCAGACAGCCTCAATA
CCACTAGCGGTCTTAATTCATCGGCTTCCATGGGTCCGTCTGAGCCATGTCTAAACGCAG
TAGGGCCGCCGATGGTGTCTCCGTATGCTTCGCAGATGTACGCTGGGGCCTTACCGCAGC
CAGGGCCGTCCACCAACAAACAAGGTCTAGCGGCGACTTTTTACAATCCCGAAACAATAC
GGTCTGAGATCTACGACAGGAACGATGATGTTTATTTGCAGCCTGATCTCAATCAGTTTC
CAGATATACCGGACAACGTGGACATGTACGCCGAGCTGGTACCCCTGGAGGGTGCCGTGA
CGCATTCGATGTCGACATCGTACCGCGCTACTAACCGTCAGAACGGTGATTATGTGGCTC
TAAGGAGGCTCCACTCTTACACGTCGCCGGCCTCCAAGCGTCTTGAAATGTGGAAGCAGA
TCGACCACCCGAACATTGTGCGTCTGGAAGAATATTTCAGCACCAAGGCTTTTAACGATA
TATCACTGGTCCTGGTGTACCAGTATCATCCAGCCGCTGTGACTCTGATGAACAAGTATT
TGTCCGGAAACGGAAACAACTCCGCCGAGGGTGGAGCTGCTTATCATGATCCGTTCTCTT
CGGACCCGGATGCACCGCGTCCGTACACCCATCAGAAAAATGCCATGCTCCGTGCGGTCG
CATGCGGTGCTTTGCTTCCGGAAGCTGTGTTGTGGAGTCTGCTCGTGCAACTGACGGCCG
GCTTGCGCGCCATACACACAGCCGGACTCGCCTGCAGGAGCCTGGAGCCGACCAAGGTGA
TCATGAACGGATGTCGAGTCCGAATTGCATGGTGCGGTGCTGCTGATGCTCTACACAGCA
ACACCAATGATGTAGTACAGGCTCAGCAAGACGATCTGACCGCTTTGGGCCGGCTGGCAC
TGGCTCTAGCCTGCCGCACCATACATTGCGACAACCTCGCAGCGTCCATGGAACTCGTCG
CTAGGACCTACTCTGCGGATCTGAAGAACCTAATTCTGTATCTGCTGTCATCCTCGCCTG
CGCGTCGTTCCGTTATCGACCTTATGCCTATGATCGGAGCTAGGTTCTATACTCAGGTGG
AGGCACTGGAGAGACGCGCTGATGCGTTTGAAGATCAGCTGTCCCAGGAGATAGATAACG
GTCGTCTCCTCCGCATATTAATCAAGCTGGGCATTGTCAACGAGCG
(1246 bp)

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