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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23050_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		inhibitor_of_nuclear_factor_kappa-B_kinase_subunit_beta_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007252 P I-kappaB phosphorylation
GO:0008384 F IkappaB kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0042325 P regulation of phosphorylation
GO:0042501 P serine phosphorylation of STAT protein
GO:0042803 F protein homodimerization activity
GO:0045121 C membrane raft
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0070498 P interleukin-1-mediated signaling pathway
GO:0071356 P cellular response to tumor necrosis factor
GO:0090002 P protein localization to plasma membrane
GO:0097110 F scaffold protein binding
GO:1903140 P regulation of establishment of endothelial barrier
GO:1903347 P negative regulation of bicellular tight junction assembly
Transcript
Level		FPKM:5.25 TPM:2.34
ORF EntryO_BomaMSG13547_3prime_partial:A_BomaMSG_c23050_g1_i3
Sequence
(Nucleotide)
CATTATGTGAATTTTATACATAATTAAATAGGTACGAGCAATTGTTGTAGATTCGTAAAT
AAATTGTAAAATACAAAAGCTACGCCTATAACATACTTTTATCGTAAGTGCTTCATGTTT
AAATTAAAAGTAATATTAATTTTAAAGCAGTAAAATGAACGATATAGTGTTCGTTGGCGA
TTGGATTAAAGACAGAGTACTGGGATCAGGCAGCTTTGGGACAGTAGTGCTGTGGAAACA
TAAAAAGACCGAAGAGAAACTCGCCATCAAAACTTGTAAATGGGGCGATGAACTCACTGA
CAAACACAGAGACAGGTGGACGAAGGAGGTTGAAATGTTGCAAAGCTGCCGAAATCCAAA
CATCGTTGGATCGAAACCCCTTCCATCTGAATTTATAAAGGGCTTAGAGCGAGGCAATCC
TTCAGGTCTACCTATAATGTGTATGGAATACTGCAGCGGAGGTGATCTTAGGCAGCAATT
GAATAAACCCGAATCATGTTCTGGACTGCGAGAAATACAAGTTCGTCAGATTCTCAGCGA
TATCAGAAATGCAATGAAGTTCTTACATCAAAAGAAAATAACTCACCGTGATCTAAAACC
AGAAAATATTGTTATGAATATTGTAGAGAATACAGAGCAAAACAATATTTCTCCTCAAAC
TGAACCAAGAGTCATATACAAACTGATAGATCTAGGTTATGCGAAGGAGATTGACTTTAA
TTCTGTGTGTGCCAGCTTTGTTGGTACTCTTCAATATTTAGCACCAGAGCTACTGTACAG
TAAAACATATAGCAATTCTGTTGACTTTTGGTCATTTGGTTTGCTTGCTTTTGAAATAAT
TTGTGGGAAAAGGCCTTTCCTTCCATTCATGTCTCCTGCACAGTGGATGCCTCACGTTGA
AAAGAAAACACATGAAAATATTTGTGTTTATGAAACTTTTCATGGAGATATTGAATATTC
AAACAATATATTTCCTGAAAATCATATGTCGGCGCCTTTTAAAGTACTAATGGAAGATTG
GCTTAGAATAGCTCTGGAATGGGATCCTAAACTGAGAGGCAGAGATTCTCATACAAGAGT
CAGATTTAATATTCCTACTGAGCAAAGAGAAGTAAGCAGTAACATCATCATTTATGACCT
ACTGGAAAATATTTTATCTCGGAAGGTAATAAGAATATTTTCTGTACCTACTCTGTCACG
ACTAGCATACCAAATCAGTGATACTACAATGGTTTCTGATTTGAAGAAATGGATTGGGCA
AGATACAAGTATGGATATAGCAGACTTAATCTTGATATGTCCAAATACTTTTACAGAACT
TGGAGAAATGGACATTGTGTCGAACTATTGGAGAGAACACTGTAACACAATGGTATACTT
GTTCAATAAAACATACATTCTTCAGAAGAACATAGAACCAGAAGTGCCAAAATCAGTACA
AAGATGCTTGGAGCATCCTAAAGCTTTGTACAATCACAAAAATAGCCAAACTTTATATAA
GAATAGCTTGTATTTTGTAAAGAATCAATCTGAAATTTATGAATCACTCATTAATGGGTT
ACTTGTTAGAGGAGAATCACTAAAAAATGAGGGCAAACAATTGCTACTAAAACACAATGC
AGTTGATAAAAGTATAAGTAATCTTCTAGCAAAGGAAGAAATAATGAAAATGCTGATTGA
AACTGGTAAGGAGCAAGTAAACAAATTAAGAGACAGTGGAAAGGGCATAAACATGCTTGG
AGGTTTCAACAAAACATTCCAAGACACAGATGAGCATTTCCTAAAAATCAGTAAACTCCA
ACAAGCCTGGAATCAATTGTCTGTTAGACTCACATCAGCTAAACGACGTTGTAATGAAAT
TGTGTCAGATGATATAAAAAACTTTGTAGCCAAATATAATTACCAAGCAGTTTATGCCAA
TGCATTCAAAATATACATTATGGCAAG
(1947 bp)

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