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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c23010_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_SPT6_[Bombyx_mori]
Ontology
GO:0000176 C nuclear exosome (RNase complex)
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0030707 P ovarian follicle cell development
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
GO:0035327 C euchromatin
GO:0035363 C histone locus body
Transcript
Level		FPKM:5.66 TPM:2.53
ORF EntryO_BomaMSG13453_complete:A_BomaMSG_c23010_g1_i1
Sequence
(Nucleotide)
GAGAACTGCACGCTGTGCTCTTACAGGAATCTAAAGATTATGTACTCAAGTGTTGTCGTC
GGAGACTGTACGACTGGTTGAAAGTAGCTCCATACGAGTCTAGAATATCTGATGATGATG
ATGAGTGGGACGCCTCGAATGGTGTGCGAGTAATGTCGGTGGCGTACGTACCGGACCGTG
CGCACAGTGCGTTCGCGTGCATCGTGGGCCCGGGCGGCGAGGTGGCCGACCATCTGCGGT
TGCCGCATCTGCTGTACCGGCGGAACGCCTGGGATGCGCTCGAGCGCCGCAACAAGGACG
CCGATATGACCGCGCTCAGGAGGTTCATTTGTCGCAAGAAGCCGCACGTGATCGTCATCG
GCGGCGAGTCCCGGGAAGCGCTCAATGTCAAAGCCGACATCTCGGACTGCGTTCAGCAGC
TGGTGGAGGACGAGCAGTTCCCGAGGATACCTATCGAGATAGCCGACAACCACTTCAGCA
AGATTTACAGCAACAGCATACGAGGAAGGAACGATTTCCGTGAATACCCAGACATCCTGC
GTCAAGCCATTTGTCAAGGTCGTCTGCTGCAAGACCCGTTGATGGAAATATCGCAGTTGT
GCGGTCCGGACGAGGAAATACTGTGCCTCCGATACCATCCGCTGCAGGATCAAATCGCCA
AGGACGATCTGCTCGAGGGCATAGAACTGGAATTCGTGAATAGGGTCAACGAAGTGGGCG
TCGACGTCAACGAGGCGGTGCTGACGGGCCGGGGGACCGAGCTGCTGCAGTACGTGTGCG
GCCTCGGCCCGAGGAAGGCGCAGGCCCTGATAAAACTCTTCAAGCAGACCAACCAGAAGC
TGGAGAACAGAACACAGTTGGTCACGGTGTGTCACATGGGCCCCAAGGTCTTCATAAACT
GTTCAGGCTTTATCAGGATAGACACGAACAGCCTCGGCGACAGTACCGAGGCGTACATTG
AAGTGCTGGACGGGTCCAGAGTGCACCCGGAGACGTACGAGTGGGCCCGCAAGATGGCGG
TCGACGCTTTGGAGTACGAAGACGAGGACGCCAACCCAGCGGGCGCTCTGGAGGAAATCC
TCGAGGCTCCAGAGAGACTTAAAGACCTAGACCTGGACGCGTTCGCTGAAGAGCTGGAAC
GGCAAGGCTTCGGTAATAAGAGCATAACCCTGTACGATATTCGAGCGGAATTGAACTCTA
GGTACAAGGATCTTAGGGTGTCGTATCGTTCGCCAACGCCCGAGGAACTGTTCGACATTT
TAACAAAAGAGTCACCTGATACGTTTTACGTGGGGAAAATGGTCTTAGCGTCTGTGATCG
GCATCACGCATAGGAAACCGCAGAGGGAGATGCTGGACCAGGCGACGCCCGTTAGAAACG
ACGAGACGGGGTTGTGGCAGTGTCCGTTTTGCTTCAAGAATGATTTTCCTGAGCTGTCCG
AAGTATGGAGCCATTTCGACGCGGGTGCGTGCCCGGGCCAGGCGACCGGCGTCCGGATCC
GGCTGGACAACGGCCTGTCCGGTTACATACACATCAAGAACCTGTCGGACCGCCACGTCA
CGGATCCGACCGAGAGGGTCCGCATCGGGCAGACCGTGCACTGCCGGGTCATCAAGATCG
ACGTCGAACGCTTCTCCGTGGACTGCACTTCAAAGTCTTCGGACCTGCTGGATAAGAATA
ATGAATGGAAACCTCCAAAGGACCCTTACTACGACCAAGAAACGGAAGACAAAGATATAC
GCAAAGAAAAAGATGCAAAACAGAACAAGGATCGCATGCAGTACGTAAAACGCGTGATAG
TACATCCGGCATTCCACAATATTTCGTTTGCGGAGGCTGAAAAGCTTATGGACAAAATGG
CACAGGGAGAGGTCATCGTGAGGCCTAGTAGTAAGGGTTCTGACCATTTGACCGTAACAT
GGAAAGTCACTGATGGAATTTATCAACACATCGACGTGAGGGAGGAAGGCAAAGAAAATG
CTTTCTCATTAGGTCGAAGTCTTTGGATACAGGAGATCGGAAGAGCGTCG
(2030 bp)

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