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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22950_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin_conjugation_factor_E4_B_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0003222 P ventricular trabecula myocardium morphogenesis
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006513 P protein monoubiquitination
GO:0008626 P granzyme-mediated apoptotic signaling pathway
GO:0009411 P response to UV
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0031175 P neuron projection development
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0034976 P response to endoplasmic reticulum stress
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044257 P cellular protein catabolic process
GO:0051082 F unfolded protein binding
GO:0051117 F ATPase binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:3.84 TPM:1.72
ORF EntryO_BomaMSG13308_complete:A_BomaMSG_c22950_g1_i1
Sequence
(Nucleotide)
TGGGAATGCACCAACGGGCCTCATCCCAGAATTACTGCTTGCTACATATCTTGATAAAGA
AATATTTGATGAGGTGTTTACTTGGCTGGTGCTTGGAGTTCGTGAAGAGATGCGCAGTGC
ATTGGGCACGGGCCACGTGTGCGGCGGGGCGGCGTTGCGAGCTCTACACGCGCTGTGCGA
GGTGCGAGCCGGGGCTCGTGGCACGCGCCGCCCTGTGTGCGAGCTGCTGGCGCGCCTACC
CTCGTTCTGTCCGGACCCAGTCACCTCAGCACCGGGCCGCGAGATCGCACGCGTGAGCTT
CCTCGGGCCCTTCTTCTCAGTATCGTTGTTCGCGGAAGAGAACCCCCGTTTGGCAGAGCG
TCTGTTCTCTTCGGGAACCGGAGACAGAAGCTTGGCCTTTGCTCTGCAACGGGAAGTGGA
AGCCAGTCGCAATACTCTGCACAACATCTGTCATAATATCCTGGTCTGTCCCGAGGCTAG
GGAGCCTTTCCTAAACTATTTCGCGGCCATACTGCAGCGAAATGAACGACGCGCACAACT
GCAGACTGATGAACGTACGCTCGCTGGTGATGGCTTCATGTTGAACGTGTGTTCGGTGTT
ACAATTGCTGTCCGTCCGCATTAAGCTGGAGCGCGTGTACCCGCTGTACACTTTCCAACC
GGACTCGTGGGCGAACGTCCGCGACGAGACTAGACTGTACTTCACCGCGCAAGAGGCCCA
GGACTGGCTCGATGAACTCAATAACGATCCGAACCACAAGTGGCCCGAGGCTAAATTCCA
GACTGTTTGTTGGTTCCTGACGCTGCACATGCATCACGTGGCACTCATTCCTGCATTACA
CACACACCAAAGACGTATTCGCGCTTTCCGTGACCTACAGAAGGTAATCGAAGAACTGAT
GGCTGCAGAACCACAATGGAGAAACAGTTTTTCAGCTCTGCGGAATCGAGAACTACTGAG
ACGTTGGAGAAGGCAGATCAAACGTCTACACAGATCGAAGCAGTGCGCGGAGACGGCGCT
GCTGGAGGGCGAGGTGATGCGGCGCAGCGTGCAGTTCTACTCGTCAGTGTGCGCGCTGCT
GTCGCGGCAGCTGGACGCGTCCGCGGGGGAGGGCCCGCCGGCGCTCGCCTTCCGCGCCAC
GCCCGAGTGGTACGTCGAGGACGTCGCCGAGTTCATGCTCTTCGCTGTGCAATACGTACC
TCAAATAGTCGCTGAATACATAGAGGATCCAATCATAACGTGGCTCCTCAGCGCCATCTG
CAATTCCCATCTCATCAAAAATCCATATCTTGTTGCGAAAATTGTCGAAGTGCTTTTCGT
GATAAACCTTTCGGTTCCGCTCAAGCTGAAAAACGTATACGAAAAGTTCATGGACCATCC
GATGTCGCAAAACGAGCTGCCCAGCGCTTTGATGAAATTCTATACGGACATTGAGACTAC
GGGCCAGAGCACGGAGTTCTACGATAAGTTCACTATTCGATTCCATATCAGTATCATATT
GAAGGGAATGTGGGAACGACCCATACACAAACAGGCCATCGTGAAGGAATCCCGTTCCGG
TCGTCAGTTCGTGAAGTTCATCAACATGTTGATGAACGACACCACATTCCTACTCGACGA
GTGTCTCACGTACCTGAAGCGCATCCACGAGGCGCAGGAGGGGGCGGCGGGCGGGGAGAC
GCGCGCCCGCACGCTCGCGCAGGACGAGAGGCAGTGCCGCTCCTACCTCACGCTCGCCAG
AGAAACGGTTGACATGCTGGAGTACTTGACGGTGGAGATCAAAGAGCCGTTTTTACGCAG
CGAGCTGGTGGACCGGCTCGCCTCCATGCTCAATTTCAACCTGCAGCAGCTCTGCGGCCC
CAAGTGTAAAAACCTTAAGGTCCGCCGGCCCGAGAAGTACGGCTGGGAGCCGCGGCGGCT
GCTGAGTCAGCTCGTGGACATCTACCTGCACCTGGACTCCCCGCAGTTCCACGCCGCGCT
GGCCGCCGACGAGAGATCGTTCCGGAAAGAACTGTTTGACGAGGCGGCCGTGCGGCTCAC
AAAGTCCTACATAAAGACACCATCAGAAATAGAACGCTTTAAAGCGCTCGCAGACAATGC
CTATCAAATTGCTGTGTCGAACCAGCAGAAAAGCGACGAATTTGCAGACGCCCCTGAAGA
GTTTCGGGATCCACTCATGGATACGCTGATGACGGATCCCGTGGTTTTACCCTCTGGGAA
GGTAATGGACAGGTCGGTGATCTTACGTCATCTACTGAACAGTGCCACGGACCCCTTCAA
CCGACAGCCTCTCTCCGAGGACCAACTACGTCCAGCGACTGAACTCAAAGAAAGAATCCA
ACAGTGGCAGCGCGAGAAAAAATCAACGTAATCGTCCAAAGCCAAGGCTAAAGTCTGATG
TACATAACATTACACATATAAAGACTAACGACAGGTGTAATCCGCCTTCGGGGACTATTG
TCCGCGCGTGACTGAGATTATCCAGAGCGTGTGTGTTTGTGAGACCGATTCGTGAACATC
TTAACTATACTAATGAACGTGTTAGACAAAACTTAGTATATATTATCGTCGTAGCTTTCC
TACTACAAGGTGTCCATTGAATCAATTGATTGATATCGATGGCACCAAATTGATTAAATA
ATACGTAGATTAAAATTCTCGTACCATAGTGTTTTTAGAGTTCGAGTGAATCAGTTTTAA
GGTGTTTTAAAAGCGTTGGCCGCGAATCTTGGAACTGTTGGACAACGGCAGATCGGAAGA
GCGT
(2764 bp)

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