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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22888_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		17_kDa_hypothetical_protein_p119_[Phlebotomus_perniciosus]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:2000036 P regulation of stem cell population maintenance
Transcript
Level		FPKM:0.67 TPM:0.30
ORF EntryO_BomaMSG13180_5prime_partial:A_BomaMSG_c22888_g1_i2
Sequence
(Nucleotide)
GATCGGAAGAGCGTTTCGGACACGGTAGAGTTCTTCCAGCGGTTGTCGACGGAGACGTTG
TTCTTCGTGTTCTACTACATGGAGGGAACGAAAGCGCAGTACCTCGCAGCGAAAGCGCTC
AAAAAACAAAGCTGGCGCTTCCATACTAAATACATGATGTGGTTCCAGAGGCACGAGGAA
CCAAAAGTCATCAACGAGGAATATGAACAGGGCACATACATCTATTTCGACTACGAGAAG
TGGGGCCAGCGCAAAAAGGAGGGCTTCACATTCGAGTACAAGTACTTAGAGGACCGAGAC
TTGAATTGAACCTGCGTCACCGAACCGCCGTCCGCACTCGCGTCTACTACACACCACCTG
CGCGCAGACCACTCGATAACTATACACGACATTCCTATATTTAGGAAATTTTTAGTTGTA
ATTACCAAAAAAAACTTATGATAAAACAACTCGCACCGTTTTTTCTGTATGTGCATACGG
GAAGCCAGCCGTGTCATTCGAAATTGAGCACGCACCGGAATGCTCACAGGTTGGAACTCG
TGTGTACGTGACGTGTTCACGAGCGCTCACGTTTGTCAGGCCGCGGCTCCGCCGTTTGCC
AACGTAAGCTAATAATAAAAAAACATGTACCTGAAATAAATTTCATGGACTGGTATTTAT
ATAGAGACAATGTTATGACGATGGTTTTACGGGAAAGATGTTTTAATGGACGTCGCATCG
AGACGATGGAAACGGATCGCGATGTCAACGCGAAGAAACGTGAAGTTACTACTACATTAT
GATCCACGATAATAGCGTCGACCGGGACTAGTGATGCTATCGATAGTTTTATATCGATGT
AATACTTTAACGGCTCGATTCTATTATCGATTTAAATGTTCGGACACGAGATTTTTTTTG
TTAATCATGAAGAAATCTTTTGTATAAATAGCTTTCTGGCAGTCAGTAATGTAGTGTTGT
TTTTTTTTTTTTTTTAATAATTGCCATTAAACCAGTC
(997 bp)

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