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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22887_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:14.02 TPM:6.26
ORF EntryO_BomaMSG13174_complete:A_BomaMSG_c22887_g1_i5
Sequence
(Nucleotide)
ATCATATTATAACATGAAACATTTCATATTATGTATATTCATGTTGCTTCCTTACCTGAG
TCATATCTGTTACACTTATTTGCATATTTATAAGTTTAAACTCTTAATGGCTTTAGTATC
TTATTCCAGATATACCCATTAAAAAAAATCGTTTTAAACACATCATGAAGTGAAAGAATC
TTGAACATTAAAATGATGATGAATTATACTGAGTACAACATGGTACAAATCCTGCCCAGT
AATCGACGTCGTCGTTATGTACATCGGGGTTTAGGTGTTTGCGATTTTAATACGAATTTT
TTCTTTTCCTGATCCCATCTATGTTGGATCCTAGTTCCCATGCCCAAAGAAAATGCAGAT
CAACTTGACTGGATTCCTAAATGGAAAGAACGCACGCCTTTTCATGGGAGAGTTATGGGA
GCTGTTGCTGAGCGCGCAGGCCAGTGAAAACGGTATACCCGAATCATTTACTCAGCAGAA
GAAAGAAGAAATAAAGAAGAGAATGGAGGAGCAGCAGAACAAGGACAAAGACAAGGAGCG
ACGGAGATCGAGGTCCCGGTCGCGTTCCCGGCGCCGCTCTCGCGACCGGCGGCGCTCGCG
AACTCGTTCTCGTGATCGTTCCAGTGACAGAAAGCATCGTAACGGCGGAAGTCCGCGTCG
ATCGAGACGGCGCAGCAGCCCGATCAGAGACAAGGTCAGCCCTGCGAAAACTGAACCGGA
AACCAAAGCTCCAAGTGTAGCAGAGAACGGTAAGTCACCAGAAAAGAATGATGAAGAGGT
TAAAGAAGAACCAGTTCAGAATAATTCTCCAACTGTCAATGAACCTGTCAATGATGAAAA
CAAGGAACCAACCATAACACAGAACGTTGAAGAGAAATCTGAAGTTGAAGGTCAGAAATC
TAGATCTGTGTCACCTGCTAAGTCAACGGACGAGAAAGAGAAAACCAATGATGAGAAACC
TGCTGATAAGTCGCGCCGATCATCTAGCGAAAGACGCTCGTCTTCAGCTTCATCCCGTGG
CAGTGTGAAGAAAAGATCGTCACATAAAAAACGACAATACCGTTCGAATCGTGATTCTTC
TACAAGTGTTAGCCCTAGGCGCAGCTCCCGAAGAGAAAGGAGTAAATCTCGCCGTAGGAG
CAGCCGACGTAGGTCGTTAGATCGTCGTGAGAGGGAAAGAGAACGGGAGAGAGAAAGAGA
ACGCGAACGTGAAAGAGAGCGACGACGCCGTGAACGAGAACGGCGTGAGAGGTCGAGAGA
ACGTCGACGATCGCTTGAAAGACGCAGACGGTCGCGTTCACGCTCTCGACGACGTTCAAG
AGACAGGTCTCGAGACCGTCGCCGCTCCCGTTCACGTCGCAGGTCGCGGTCGAGGCGTCG
CTCAGGACGCAGGTCACGCGACCGACGCTCACGTGATCGCCGCTCCAAAGACCGCCGCTC
ACGAGATAAGTCCAGAGAGCGAAAATCGCGCGATCGCTCCAGGAGATCCAGGGACAGGAA
ATCTCGCGATAGAAGGTCTAGCGATATTATCAAGGAGCGTTTAGAGAAATCTGTCTCGAT
TCCGAGAAAAGAAAATAATGACAAATTACCCAAAAAGCCTGAGCACCTGCCTATTCCGCG
TGAGCAATCTAAAGAGCGCATTATATCTAGCACAAGCCGAGAATCATCAGTAGCTGTTGA
AAAACCCCCACCAGAACCTTTTAATGACGGAAAAACCCAGTCAGACCACACTGACGACGA
AGAGAAAGAAGATATTGTAAATATTCCAAACCTGCGTGAATACTCAAAAAGTCTTTCACG
CACTCCATCACCGTTCTTGCGAAGACATGAAATTGACAAAAACAAGAAATCTGATGAAGT
TTCGGGAAAAGAGCAGAATGAGGACGAAATAAAAACCAAGGAATCCAAAAGAGCTAAACG
TAAAGCCCATCAATCTGATTCTGAAAGTGCGAGTAGCGAGGAGCTATCGAAATCCAAAAG
TAAGTCCAAAATCAAGCGTAAGGAGAAAGGTACATCTAAGAGAAATAAGAAACTCAAAAA
AGAGAGCTCTTCTAGCGATAGCGATTCTGAGGAATCTTCTTCTAGTGAATCTGAAGAAGA
TAGGAAGAAGAAAAGCAAAAAGAATGCTAAAAAGAAGTTGGCCAAGAAATCAAGAAAGAA
AAGAGCTCGCTCGTCGAGCTCCGACTCCAGTTCGGAAGAAGAAGTTAAACACAAGGCTTC
AAAGACAAAACAAAAAAATGTCGTCGACGAATCTGATGTTGATAAGAAGTCTAAAAAACG
CGCCAAGGATGCGAGTAGCGAAAGGTCAAGGTCTGAGAAAGTTGAAAACAAGCTCAAGTC
CAAAAAAGTCGATTCTGAGGATTCCCAAGATGATAGTTCGGATACTGATGCAAAATCTAA
GAAGAAAAACACTAAACGTGATACTTCTAGTTCAGAAAAAGACCCAAAACGCGGTAAAAA
AACTGACTCTATTAAGGAAAAAGCCTTATCACCAGAAGTTGCTAAATTAAAGAAAGTAGA
GGATAAACCAGCAAAAGTGAAAGTAGACGATGCTAAACCTAAATCTCGTGACGAAAACGA
GAAAAAACCTAAAAAGAGGGAAAAGGAAGAGTCCTCTTCTGAAAGTGACCAGGTGTCAAA
GAAGAAAGCAAGGAAGAAGGTAACAGACTCAGAGTCAGATTCAGACAGTGATGAACCTAA
GAAATCCAAGAAAAATAAGAAACATAAGAAGCATTCTAAAAAGCATAAGAAACACAAGAA
GCATAAGAAATCATCAAAGAAAAAAGAGGATTCTTCTGATAGCGATGAAGCCGAGGAAGA
AGAGGAAGAAGGAAAAGTTAATAACGAAGATTTGGAGAAGAAACTGAGAGAGAGAGCATT
GAAGTCGATGAAGAAACAAACTAGTGTTTCTGGATCCGATTAGTGTTCGGTTTTTTTTCT
ATTTGACTTCTAAATAAAATTTCATTGAACGTACAGCATGTTATTAAAATATTTTAATGA
ATTTGCTGAAACGATTTTAATTAACATATATTTCATATTGTTAGTAATAATAAATAAAAT
AATACGAAAAAAAAAAA
(3077 bp)

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