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Last updated: 2022/11/18
NameA_BomaMSG_c22887_g1_i4
Scaffold_id
NCBI non-redundant
(nr)
serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level
FPKM:1.44 TPM:0.65
ORF EntryO_BomaMSG13171_complete:A_BomaMSG_c22887_g1_i4
Sequence
(Nucleotide)
AAAATATCATAGTCATCTTCAATAATTTCAAATAAAAGAAACTGCAATTGAAAAATAAAT
GTCATATGTAATTGATTGCGTATGGATATTTTTATGGTCCCCATCGGTTAGCGCGCCGTC
GAAGTCATCCCCGCAAGGTGCTGCCAGCTCCCCGACGCTGCCTGCTAGCTACGCTCTTTC
GGAGGCCCTTAGCATATCTGCGATGCAAGTTTTGAAGAGGGCGAGTGTCCGGTGAGTGTT
GGCGCGGGGCGTCATATGCAGAGCATCACATCGGTCTACAACTTCGCTGCGCCCTCATCA
TCTCTGCATCGTCGCCACTCGACACGCTATGAAGACTTCTAAAAAACATGAAACATTTCA
TATTATGTATATTCATGTTGCTTCCTTACCTGAGTCATATCTGTTACACTTATTTGCATA
TTTATAAGTTTAAACTCTTAATGGCTTTAGTATCTTATTCCAGATATACCCATTAAAAAA
AATCGTTTTAAACACATCATGAAGTGAAAGAATCTTGAACATTAAAATGATGATGAATTA
TACTGAGTACAACATGGTACAAATCCTGCCCAGTAATCGACGTCGTCGTTATGTACATCG
GGGTTTAGGTGTTTGCGATTTTAATACGAATTTTTTCTTTTCCTGATCCCATCTATGTTG
GATCCTAGTTCCCATGCCCAAAGAAAATGCAGATCAACTTGACTGGATTCCTAAATGGAA
AGAACGCACGCCTTTTCATGGGAGAGTTATGGGAGCTGTTGCTGAGCGCGCAGGCCAGTG
AAAACGGTATACCCGAATCATTTACTCAGCAGAAGAAAGAAGAAATAAAGAAGAGAATGG
AGGAGCAGCAGAACAAGGACAAAGACAAGGAGCGACGGAGATCGAGGTCCCGGTCGCGTT
CCCGGCGCCGCTCTCGCGACCGGCGGCGCTCGCGAACTCGTTCTCGTGATCGTTCCAGTG
ACAGAAAGCATCGTAACGGCGGAAGTCCGCGTCGATCGAGACGGCGCAGCAGCCCGATCA
GAGACAAGGTCAGCCCTGCGAAAACTGAACCGGAAACCAAAGCTCCAAGTGTAGCAGAGA
ACGGTAAGTCACCAGAAAAGAATGATGAAGAGGTTAAAGAAGAACCAGTTCAGAATAATT
CTCCAACTGTCAATGAACCTGTCAATGATGAAAACAAGGAACCAACCATAACACAGAACG
TTGAAGAGAAATCTGAAGTTGAAGGTCAGAAATCTAGATCTGTGTCACCTGCTAAGTCAA
CGGACGAGAAAGAGAAAACCAATGATGAGAAACCTGCTGATAAGTCGCGCCGATCATCTA
GCGAAAGACGCTCGTCTTCAGCTTCATCCCGTGGCAGTGTGAAGAAAAGATCGTCACATA
AAAAACGACAATACCGTTCGAATCGTGATTCTTCTACAAGTGTTAGCCCTAGGCGCAGCT
CCCGAAGAGAAAGGAGTAAATCTCGCCGTAGGAGCAGCCGACGTAGGTCGTTAGATCGTC
GTGAGAGGGAAAGAGAACGGGAGAGAGAAAGAGAACGCGAACGTGAAAGAGAGCGACGAC
GCCGTGAACGAGAACGGCGTGAGAGGTCGAGAGAACGTCGACGATCGCTTGAAAGACGCA
GACGGTCGCGTTCACGCTCTCGACGACGTTCAAGAGACAGGTCTCGAGACCGTCGCCGCT
CCCGTTCACGTCGCAGGTCGCGGTCGAGGCGTCGCTCAGGACGCAGGTCACGCGACCGAC
GCTCACGTGATCGCCGCTCCAAAGACCGCCGCTCACGAGATAAGTCCAGAGAGCGAAAAT
CGCGCGATCGCTCCAGGAGATCCAGGGACAGGAAATCTCGCGATAGAAGGTCTAGCGATA
TTATCAAGGAGCGTTTAGAGAAATCTGTCTCGATTCCGAGAAAAGAAAATAATGACAAAT
TACCCAAAAAGCCTGAGCACCTGCCTATTCCGCGTGAGCAATCTAAAGAGCGCATTATAT
CTAGCACAAGCCGAGAATCATCAGTAGCTGTTGAAAAACCCCCACCAGAACCTTTTAATG
ACGGAAAAACCCAGTCAGACCACACTGACGACGAAGAGAAAGAAGATATTGTAAATATTC
CAAACCTGCGTGAATACTCAAAAAGTCTTTCACGCACTCCATCACCGTTCTTGCGAAGAC
ATGAAATTGACAAAAACAAGAAATCTGATGAAGTTTCGGGAAAAGAGCAGAATGAGGACG
AAATAAAAACCAAGGAATCCAAAAGAGCTAAACGTAAAGCCCATCAATCTGATTCTGAAA
GTGCGAGTAGCGAGGAGCTATCGAAATCCAAAAGTAAGTCCAAAATCAAGCGTAAGGAGA
AAGGTACATCTAAGAGAAATAAGAAACTCAAAAAAGAGAGCTCTTCTAGCGATAGCGATT
CTGAGGAATCTTCTTCTAGTGAATCTGAAGAAGATAGGAAGAAGAAAAGCAAAAAGAATG
CTAAAAAGAAGTTGGCCAAGAAATCAAGAAAGAAAAGAGCTCGCTCGTCGAGCTCCGACT
CCAGTTCGGAAGAAGAAGTTAAACACAAGGCTTCAAAGACAAAACAAAAAAATGTCGTCG
ACGAATCTGATGTTGATAAGAAGTCTAAAAAACGCGCCAAGGATGCGAGTAGCGAAAGGT
CAAGGTCTGAGAAAGTTGAAAACAAGCTCAAGTCCAAAAAAGTCGATTCTGAGGATTCCC
AAGATGATAGTTCGGATACTGATGCAAAATCTAAGAAGAAAAACACTAAACGTGATACTT
CTAGTTCAGAAAAAGACCCAAAACGCGGTAAAAAAACTGACTCTATTAAGGAAAAAGCCT
TATCACCAGAAGTTGCTAAATTAAAGAAAGTAGAGGATAAACCAGCAAAAGTGAAAGTAG
ACGATGCTAAACCTAAATCTCGTGACGAAAACGAGAAAAAACCTAAAAAGAGGGAAAAGG
AAGAGTCCTCTTCTGAAAGTGACCAGGTGTCAAAGAAGAAAGCAAGGAAGAAGGTAACAG
ACTCAGAGTCAGATTCAGACAGTGATGAACCTAAGAAATCCAAGAAAAATAAGAAACATA
AGAAGCATTCTAAAAAGCATAAGAAACACAAGAAGCATAAGAAATCATCAAAGAAAAAAG
AGGATTCTTCTGATAGCGATGAAGCCGAGGAAGAAGAGGAAGAAGGAAAAGTTAATAACG
AAGATTTGGAGAAGAAACTGAGAGAGAGAGCATTGAAGTCGATGAAGAAACAAACTAGTG
TTTCTGGATCCGATTAGTGTTCGGTTTTTTTTCTATTTGACTTCTAAATAAAATTTCATT
GAACGTACAGCATGTTATTAAAATATTTTAATGAATTTGCTGAAACGATTTTAATTAACA
TATATTTCATATTGTTAGTAATAATAAATAAAATAATACGAAAAAAAAAAA
(3411 bp)

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