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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22877_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:6.93 TPM:3.10
ORF EntryO_BomaMSG13132_5prime_partial:A_BomaMSG_c22877_g1_i2
Sequence
(Nucleotide)
GAAATGAGATTCCGTATAGTAAATTGTCGAATCGTCTGTTGCCCAAACATATAAAGGTTA
TTGCTTGGATGCCAATACCGCAGGACAGACCGGATTACAGTGCACGATTCGATTGTAAAA
AACGTTCCTACAAATATTATTTCCCGCACTCCGGGCTGAACCTGCCCGCCATGCTGGAAG
CGTGCCGTCACATGATCGGGTCGCACGATTTCCGCCATCTCTGTAAAATGGACGTCGGTA
ATGGTGTATTGGAATTTATAAGAAGAATAATGAACGTTGACATCGTACCTGTCGATGTTA
ATGATGTTGACAAACCAACATCAATGTACTATCTGCTGATAGAAGGAAACGCATTTCTGT
GGCATCAGATACGTTGCATTATGGGCGTCTTACTGCTGATAGGAGAAGAAAAAGAAAGAC
CTGACGTGGTGTTAGAATTGTTGGACGTTGAGAAGAATCGGGGAAAACCGCAATACAGCA
TGGCGTCTGACCTCCCGTTGAATTTGTTCAAATGTGCGTACGAGATAGAAGATACTAATC
GATGGGTGTACGAAAGAGAAGCACTGATCACTCTCATATCTGATCTGAGAACGGAATGGA
CTATGCACGCCGTCAAGACAACGATGATTCAAGATTACATACGCGAGCTAGAAAAGGTTC
CTCTGACGAGCGAGACGGAAGATAGAGCCCATGACGAGTGCGAGCGAGACGAAATCGCGT
CGTACGCGGCGTGCTTGCTTCAAGGGGTGAAACCGAAAAATTATACTCCATTGATGAAAA
GACCCACATGTTCAACGCTACACGAAAAGATTGCGCATTACAAGAAGAGACGGAAGATAA
TAACAAGCTAATAATTTCAAGGGTCATTAACTCTAGAAGAGGCATTTTTTGCATTTTTAT
AATAAAAAATAATTTTGATCGGAAAAAAAAA
(931 bp)

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