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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22756_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX17_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:7.58 TPM:3.39
ORF EntryO_BomaMSG12893_3prime_partial:A_BomaMSG_c22756_g1_i2
Sequence
(Nucleotide)
CTTGTATTGTAGTTCGTTGAGATCATTTAGATCGTTTCGTCTAGCGGTGCGCTAATAAGT
TTGAACACTTAGTTCAACATTTACGAGAAAAAAGTGCCTACATTTAATAAATCAGATTAT
AATTAGAATTAGGTGTTTTGCATCATCGTTTGTATAGCTAAAAACACAATGGGCCGCGGA
AGGGACCGTAGTCGTGATAGGCGTCGCAGTCGATCTCGAAGCCGAAGTAGGAGTCGCAGC
CGTAGCAGAAGCCCTCGTTATGGACTGGGCTCAGGTGGTGGTGGTGGTGGTGGTTATGGC
GGTGGTGGACGCAGAAGTAACCCGGGAGCCAGCCTTCGGAAACCTAAGTGGGATTTGAGT
CGTTTAAAACCATTTAAGAAAGATTTTTATGTCCCACATTCAGACGTTGAAAAGAGACCT
GAATCGGATGTTGAAGCCTGGAGAAGTGAAAATGAAATTACTTTGAAAGGTCGAAATATA
CCAAAACCAACACTAACTTTTGATGAGGCTGGTTTTCCAGATTATGTTATGGATGAAATA
GATAAAATGGGGTTTGCTAAGCCTACACCCATTCAAGCCCAAGGTTGGCCTATTGCTCTT
AGTGGCTATGACATGGTAGGAATAGCATCAACAGGTTCTGGAAAAACTCTTTCCTATATA
TTGCCTGCAATTGTACATATTAACAATCAACCTAAGTCCAGTAGAGGGGATGGACCAATA
GCACTGGTACTGGCACCCACTAGAGAATTAGCCCAACAAATACAAGAAGTTTGTGATAAA
TTTGCAAATACATCAAAAATTCACAACACTTGTTTGTTTGGAGGTGCACCTAAAGGACCA
CAAGCAAGAGATTTAGATGCAGGTGTAGAAATAGTGATTGCAACACCTGGTAGATTGCTT
GATTTCTTAGAAAGTGGACGTACAAATCTGAAACGTTGTACATACTTAGTTCTTGATGAA
GC
(962 bp)

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