SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22743_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_SUMO-protein_ligase_RanBP2_[Bombyx_mori]
Ontology
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003723 F RNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0006457 P protein folding
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0031965 C nuclear membrane
GO:0033132 P negative regulation of glucokinase activity
GO:0042405 C nuclear inclusion body
GO:0044615 C nuclear pore nuclear basket
GO:0046872 F metal ion binding
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0090526 P regulation of gluconeogenesis
Transcript
Level		FPKM:6.53 TPM:2.92
ORF EntryO_BomaMSG12842_complete:A_BomaMSG_c22743_g1_i1
Sequence
(Nucleotide)
CTGAAATGGAATTTTCACCAATGAAAAATGAAACAAAGGCCTATTTTTGGGTCGCCAACG
ATTTTGCAGATGAAGCAGTGGTACTTGAAATGTTTTGCATACGTTTCAAGACTTCTGATA
TAGCACAGGAATTTTATAGAAATTTTGAAAAAGCACGCTTAGAAGCAGCTAATTCAAAGA
CTGTTGAAATCCACACTGACAAACATGATTTAAAAAATACTACCAAGGCATCTACCCCTA
GTGACGTTTCTTCCAAATCTGAAGACCATCCTAAATCTACTCCTGGTAAATCTGTGCTTG
GAGGATTCACTTTTAGTAGTACACCAAACATAAAACCAATTAAGGATGAAAAAGAAGTCT
GTTCTAAACCAACTGAAACATCTGTAGGTAAATCCAACCCATTTACTGGCTTTTCTTTGA
AATCTATGTCAAATTCACCATTTTCCAATTTGTCAACTGTGAATACGAATATATTTAGTA
AAAATACTACACCTCCACAAGACGCTGCTAAAAAATTAAACATATCTGACACAGTAGAGG
ACTTTGAACCCACTGCAGAATTTAAACCAGTTGTACCTTTACCTACATTGATTGATCAAA
AAACTGGAGAAGAAGACGAAAATGTGTTGTTTGAGAACCGTGCTAAACTCCTACGTTTCG
ATGCTTCAGACAAAGAATGGAAAGAGCGAGGACTAGGTAACATGAAGTTACTTATACACA
AAGAAAATACCCAAAAAGTACGATTACTAATGAGACGAGAACAAACTTTGAAAGTATGTT
GCAATCATTCAGTAACAAAATTTATGATATTCCAAAAAATGCAGAATATGGAGAAAGCTG
TTACTTGGTGCGCTAAGGACTTTTCAGAAGGAGAACTGGTAACACAAACATTTTGTTTGC
GTTTTAAAACTCCAGAGCAATGCGGAAAATTTATTGATGCTGTAAACATGGCACAGAAAA
ATATGGAAGATGAATCAAAAACTTCCAAGGAAGGAAACAATGCAGCCACACAGAAC
(1016 bp)

- SilkBase 1999-2023 -