SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22692_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:2.22 TPM:0.99
ORF EntryO_BomaMSG12742_complete:A_BomaMSG_c22692_g1_i3
Sequence
(Nucleotide)
TTTATATTGTTTAGTTGTAAACTTTCTTGATTTAGCTTGCATGTAACACGTGAACGGCTA
TGTTTTGTAACATCCATTCTACTTTTTCTTTGTTTTTTTTTCATTTTGGAAATGTCTGTG
CACTATAAATTCAAAAGTGCATTGGATTATGACACGGTTACATTCGACGGTCTTCACATA
TCTGTAGGTGATCTGAAAGCTGCAATATCTCAGCAAAAACGCATTGGCAAAACTTCGGAC
TTCGATTTAGAAATCACTAATGCTCAAACCAAAGAGATATATGTTGATGACAATGCTTTG
ATTCCAAAGAATACATCTCTCCTGGTTGCCAGAGTTCCACTTTCTCAACAACCAAAGAAG
CAGTGGGAAGGCTCAAATAGTAATTCAGCTCCACATAAAGATGTTACTGTTAATAAAGGA
CTGGCTGATCTATCTCGCATGGAAGGTAGCGAACAGGATAAAATAAATGCTATGATATCA
CAATCAACATTTGACTACGACCCTAGCAATTATCAGAAAATAAGAGGACAAAATCAGAGA
GGGGCTGTGCCATCTAATTACATTTGTTATAAGTGTCAAAAGCGAGGACACTGGATAAAA
GATTGTCCTGCTGCAAACTCAGGCGAGCCAGTGGAAATACGACGGAGCACAGGTATTCCT
CGTAGTTTTATGGTACCTGTTGAAGGACCAAAGGCACCGGGCGCCATGATGACTCCGAGT
GGAACCTTTGCCGTGCCTGCCGTAGATCATGAGGCTTATATGGCCTCTGAGAACTGTGCT
GGTGATCCATCTGGTAGCGCACCCAGCGCTCCCGAACCAACCATCCCGGATGAACTAATT
TGTAGTCTGTGTCGCGATCTTCTCACCGACGCTGTAATGATACCGTGCTGTGGAAACTCT
TTTTGTGATGAATGCATAAGAGGTGCGTTACTGGAATCTGAGGATCATGAATGTCCCGAC
TGTCGGGAAAAAGAAATATCTCCAACAACACTTATTCCAAACAGATTCTTGAGGAACTCT
GTGTCGTCTTTTCGCAATCAAACTGGATACAGCCGGCGAGCACCTCATCGACCCTCGGTC
ACGCCAGCTCAAGCCCGTGCTCCGATAAAAGAGGCAACCACTGCATCGAGTGTACAACAA
CCTCCACCGAATGGACCCGTTAAACCGCAAGTCACAGCCTCTGTCGGCCATCAACCGATG
ATAAAACCAGTCGTCGAAAATCCAAATTCATCCATACCACTCAATTTACCTAGAATTGAA
GAACAAAGGGCTAGCACTCCAACAATAGATGAACGAAGAGAACCAATGGAACGAAGAGAT
CCAATGTCTTCTCAGATACCGTACAATCGAGGTCCTCACCCGTTCGCTCATGGAGCATCG
CAACCACCTCAACGTTTTAACGATCCACCGCGATTCGGTCCGCCGCCCGGTCCTGGATTT
GTTGAGCGTTTTCCTCCTGAACCGTATCAACCACCTCCGCCCGGTATCAAAGAATCGCCT
TCTAACAGGCCGGGTGAGGATCCGCTGGAGGCTTTCAACCGGATGATACGCGAGAAGGAG
ATGCGAGCCAAGCGGCGTGAGGAGGAGCGGCGCCGCGAGCTGTCTCCGTCTCGCTCTCGC
TCCCGTTCTCGCACGCGCACCCGCACGCGCTCACGCACGCCGCGCGTTCGCGCCCGCAGC
CGCGCCTCCAGCCGCCCGCGGTACTCTAGGTCGCGTTCGATGTCGCGCGGCCGCTTGCGA
CGTTCACCGTGGTCGCCAAGAAGACGCCGCACGCGCAGCCGCTCTCTTTCGCTAACGAGG
TCGCCGTCCCCCCGGCGTCGCATGCGGTCTCCCATACGGTACCGTTCGCCCCCTCTGCGG
TCGCCGCCCCGCTCGCCGCTACGCTCGCCGATCCGCTCCCCGCTCCGCTCGCCGGTGCGG
TCCCCACGCCGCACGCCGCGACGTTCGCCGCCGCCACCGAGATCCTCACCGCACAGATAT
GCCGGAGTATACGACGAACTAATGTCACCCCCGAGACGTAGCGTAGAGCCGCCGTATGGA
GCCAGATACGGACCTAGAAATAGTATTCCACCACCATCATATCCACCTATAGGTGTGAAA
ACAATAGCTCCCATGGGCGGTATCCCGATTCAAGCTGATCAACCACCTGGCTATCGAGGG
CGTTATGACATGCCACCATTTGAAGACATTCCTCCTGGTCTGGAGCCACCTGTACCAGGA
TTTGAACCATCGCCTTTTGAGAAACCGTCTTTTGGACCACCAGTTGGACTTGATCGTGAA
AGATTACCACATCCAAATTACAGGGATTCGTATAGACCTCCAGCTTACGTCGAAGGCCCA
CCTCCCTTTAGAGACATACCAATAGCCGTTGGTCCTACAGAAATTCCAGTACACGTTGGT
GAACAATCTCGCTATCGAGATAATTTTAGACCAGCACCTTATCGTGATCAAGGTTCAGTA
CCTTTTAGGGACGGGCCTCCTTATAGAGAATCAGGATCACAACCCCCTCC
(2510 bp)

- SilkBase 1999-2023 -