SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22662_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		optineurin_isoform_X3_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0008063 P Toll signaling pathway
GO:0008385 C IkappaB kinase complex
GO:0019730 P antimicrobial humoral response
GO:0030163 P protein catabolic process
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050829 P defense response to Gram-negative bacterium
GO:0051607 P defense response to virus
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:2000647 P negative regulation of stem cell proliferation
Transcript
Level		FPKM:2.50 TPM:1.12
ORF EntryO_BomaMSG12681_3prime_partial:A_BomaMSG_c22662_g1_i2
Sequence
(Nucleotide)
CATCGGTCAAGTAAGGGGGCAATATCGGTCAAGTAAGGGGGACGTTGTCGATATTCGAAG
GGATATTCAAAGATTGTAGTAACATCCTCGACAGCAAGGCCAAGGAAGCGAAGAATCCCG
GAACTCCCAACATTGAGATGCTGACCTCGGCGCTTGTGGCCCGGGGACAGGAGCTGCAGA
TGCTGAAAGTTGAGATCGATAAGCTGAAGGAGGAGAAAGAGGACACGGAGCTTTTGAAAG
CACAACTCGAACTGTACAAGAGCGACTTCGAAGCGGAACGAGAGTCTCGTCAAGAGATGG
CCAGCGAAAAGGAGACCGTGCTCACGGACCTCAGGAAAACCCAACGAATGAACCAAGAGC
TGACGCAACAGCTGGACGATGTACGGAGGCTGAACTCGGACGTTTACCAGAGGGCCACAG
CAAAGCGATCGGCGCCCTCCGCCGCCGCCCCCCG
(454 bp)

- SilkBase 1999-2023 -