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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22635_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		pre-mRNA-processing_factor_17_[Bombyx_mori]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000386 F second spliceosomal transesterification activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.34 TPM:2.83
ORF EntryO_BomaMSG12622_complete:A_BomaMSG_c22635_g1_i2
Sequence
(Nucleotide)
CCTACCTACAAATGTTGATATGAACTATTTTAATCGTGTTCATTTTTGTTTAAGAACATT
AAAATAATTGATGAATTGTGACATCATCATCACTGTACATACTTCAATATAAAATTTTAA
TTATTAACAAAAATGCTCAATATAAAAAAATACGGCAGTAGTTCAGAGGATGAAAGTGAT
GATACAGAAACAAACCAGTTCAGCAATGAAGCTCTCTTGACCCATCTTAAGCCTGTTGAT
CCGAGTTTGTCGGTGGCCAAGACCATGCAAGTATGTGCTGCTCCAGCTGTGGTGCCTACG
AATGAAGATGACACTAGAGTTTTAATACCAGCAAATGCAAAAGAGTTAACACACAATCCA
AAGTATGAAGAGCTGTTTGCACCTGCTTTCGGACCAGAGAATCCATTTCAAACACAGCAA
ATGAAGGCAACGAGAAACATACTATCTGGCTATGTAGAATTGGCACATATTAGCGATTTT
CAGTTTGAGAATCAACGAAGAACATTTACGAGTTATGGTTATGCTGTAGATCCTTCTACA
AATGTTGAGGAGCAAGAAGGAGATGCTATAGTGAAATCTGCTATGATAGACCCTAAAGAA
GATACAGAAGGCAAATCAGTTTTTGAAACAATAAAAAAGCGACCCCTAGATAAAAAGAAG
AGAACCAAAAATGACAATCCTGAAGACATTAATGGATTTCTAGGACCCTGGGGAGGTTTT
GAAGGAGAACAGAGGATAATGAAGCCGGAAGGCGATGAAGCAAAAGAATTAGAAGAGATT
TTAGCTAAGAGACAGAAGAAAGGAAAAGTTGATGATGATAAACCTTTGGAAGAGAGATCT
ATATTACACATTGACAAGGTCACCGATTATCAGGGTCGGTCTTGGATCGAGGCGCCCCGA
AGCGAAACACAACTGCGAAGCGAGTCACCTCCCGACAAATGTTTCCTGCCGAAGGCGCAC
ATATTCACGTGGAAGGGTCACACGAAGGGCGTGGCGGCGGCGCGCTGGTTCCCCTCGACG
GCGCACCTCATGCTCTCCGCCGGCATGGACTGCAGGGTCAAGATATGGGAGGTGTACGGT
GACCGTCGCTGCATCAGAACGTATTTCGGGCACCGGCAGGCCGTCCGAGACGTCAACTTC
AACAATTCCGGGAAACAGTTTCTGTCGGCTGCGTACGACCGGTACATAAAGCTGTGGGAC
ACGGAGTCGGGCGCGTGCGTGTCCCGGTTCACGTCCCGGAAGGTGCCGTACTGCGCCAAG
TTCCACCCGGACGCCGACAAACAGCACCTGTTCGTCGCCGGCACCTCCGACAAGAAGATC
ATATGCTGGGACGTTCGGAGTGGCGAAATAGTCCAAGAGTACGACAGGCATCTCGGTGCG
GTCAACACCATCACCTTCGTCGATGAGAATAGGAGATTCGTGACCACATCCGACGACAAG
AGTCTGCGGGTCTGGGAGTGGGACATCCCGGTGGACATGAAGTACATCGCGGACCCGACG
ATGCACTCCCTGCCGGCCGTCACCGCCGCGCCCAACGGCAAGTGGCTCGCGTGCCAGTCC
ATGGACAACAAGGTCATCGTGTTCAGCGCGCTCAACCGCTTCAAGATGAACAGGAAGAAG
ACGTTCACCGGGCACATGGTGGCCGGGTACGCCTGCACCGTGGACTTCTCCCCGGACATG
AGTTATTTGGTGTCGGGTGACGCGGACGGGAAATGCTACATTTGGGATTGGAAGACGACG
AAACTTTATAAGAAGTGGAAAGCTCACGACGGAGTTTGCATAACCTCACTGTGGCACCCA
CATGAGCCCAGCAAGCTGCTTACCGCGGGCTGGGACGGCGCCATCAAATACTGGGACTGA
ATAAAACAATCAAAACCATTAAAAAAAAAAAAA
(1893 bp)

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