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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22593_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		sorting_nexin-27_isoform_X1_[Bombyx_mori]
Ontology
GO:0001772 C immunological synapse
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0042493 P response to xenobiotic stimulus
GO:0071203 C WASH complex
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:4.83 TPM:2.16
ORF EntryO_BomaMSG12515_complete:A_BomaMSG_c22593_g1_i1
Sequence
(Nucleotide)
GACAGTTTGTCTGTGGCTTCAGGCTTAGAAATGAAATTCGTTCAAAATGGCTGAGACGGA
AACCGATAATAGTAGTGTAGTTAGAGCGGAGAGAAACAACAAGAGCAATAACAATGGCAA
CGGGCCACGACGCGTTACTATATATAAAACGGAGACCGGGTTTGGTTTTAACGTCCGCGG
CCAAGTGTCTGAGGGTGGACAGCTAAGATCGATCAACGGGGAATTGTATGCTCCTCTGCA
GCATGTCAGCGCCGTGCTGGAGAACGGAGCGGCTGAACAGGCCGGCATCAGAAAAGGAGA
CCGAATATTAGAAGTCAATGGCGTGAACGTGGAAGGCTCGACCCACAGACAAGTGGTGGA
CCTCATCAAGTCCGGTGGCGACTGTCTCACTCTCACAGTCATTTCAGTCACACAGAGGGA
AGCAGAGCGCCTGGAACCATGCGACGACAGCTCAGCTCCGGTGGGAGTTATCGGAGGGGC
AGCCAACTCTCGCGCGACGGTCTACCAGCGCTACGACTACACCGACAAGAGATCTCTGCC
CGTCTCTATACCGGACTACAGAATCGTCATGGAGAGAAATACCGGCAGATCGTACATAGC
GTTCAATATCCACATGGCCGGGCGGCATCTCTGCAGCAGAAGGTACAGGGAATTCGCGGC
CCTACACCAAGTCCTCAGGAAGGAGTTTATCGGATTCAACTTCCCTAAATTACCAGGAAA
ATGGCCATTTACTTTGAGCGAACAGCAGCTCGACTCGAGGAGGAGGGGGCTAGAACAGTA
TTTAGAAAAGGTGTGCGCAGTGCGCGTGATCGCGGAGTGCGAGAGCGTGCAGGAGTTCCT
GACGGACTGCGACGACAGCTCGAACCCGGCGCCCGTGGAGCTGAAGGTGCTGCTGCCGGA
CCGCGACGTGGCCACCGTGTCCGTGCTGCGCTCCACGCGCGCCGACCTCGTGTACCGCGC
CGTCGCCGACAAGATCCGCCTCGCCGACACGGTGCAGCAGTACTTCTACCTCTTCGAGAT
CGTCGAGTACAACTTCGAGCGCAAGCTGCAGCCCAACGAGTGTCCGCACTCGCTGTACAT
ACAGAACTACTCGACGGCGTCCAGCAGCTGCCTCTGCATCCGCAAGTGGCTGTTCAACCC
GCGCGTCGAGGTGGCGCTGGTGGCGGAAGACCCGCTCGCCGCCAACTTTATATTTTGGCA
GGCGGTGGAGGACGTGAACCGCGGCACGTGCGCGGCCGGCGCCCGCCTCTACCAGCTCAA
GGCCATGCAGGAGCCGCGCCGCGCGCACGACTACCTCGCGCTCGCACGCACGCTGCCCGG
CTACGGACACGTCGCCATCCCGCACCCCACGCTCCGCCTGGCGCTCGGCTGGAGCGGCAT
CAAGCTGTCGCCGCACGAGGAGGAGGCGCCGGGCGAGGAGTGCGCGGAGGTGCCGTGGAG
TTGCGTGCTGGGCTGGGCGCGGGACGACGACGCCACCGCCGTGCGCCTCACCTACGCGCG
ACCCGACCGCCCGCCGCGCACGCTGCTGCTCTGCACGCCATACTACCAGTTCCTGGCCAA
CTGCATGGACAGAATAGCGGAGGAGGCGAACTGGGCCGACACCGGCGAGTAACGCACCCG
CGCGACCACAACACTTCTTTCACTCAACGAATGGAATGCTGGGAGATTATAACAGATTAC
CTAAATTGTCTTTCCGGTTAACGGTAGACAGTGTGGTCATGTTAAT
(1726 bp)

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