SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22582_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		ras-related_protein_Rab-9B_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032880 P regulation of protein localization
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045335 C phagocytic vesicle
GO:0045921 P positive regulation of exocytosis
GO:0052405 P negative regulation by host of symbiont catalytic activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:6.99 TPM:3.12
ORF EntryO_BomaMSG12486_complete:A_BomaMSG_c22582_g1_i3
Sequence
(Nucleotide)
GGTTCATGTTGTTGACTAGTTCACCTTCATAAACGACTGGTCGTTTTTAAATTAAAAAAA
TTAATTGAAAATACAATAATCAAACGAAAGCTTTAAGTTTGAAAATATAACTACATCACA
CTATTCAGACTAAACTAATCGCTTTGAAACTAATTAAAAAGTGAGTCATTAATTAAACAA
CCGCGTTTTGTAGTCAGATTCAAGGCTGTTGCAATAAAAAATTCGTTTCAGTGTTAGATA
ATGTCTGACTTAGTTTAAATAATGGAGGAAAATGATCGAAGAAATCAGAACAAGAACACT
TTATTGAAAATTGTGATACTCGGTGACGGTGGAGTCGGTAAATCATGTTTGATGAGCAGA
TTCATTTCGAACCATTTCGATGATCATAGTTTCCACACTATAGGTGTTGAATTCATGAAT
AAAACCATAGAAGTAAACGGAAAACAGTATACACTCCAGGTATGGGACACGGCCGGCCAA
GAAAGGTTCAAGTCGCTTCGGACTCCATTCTACAGAGGATCGGATATATGCATACTGGCC
TACGCTATAGATGACAGAAGTTCATTCAATAACATCAAGATGTGGTTAAACGAATTCCTG
CATTACGCCGGCGTCAAGAACGGCATTGAAAGATATCCTTTCATGGTCGTTGGTAATAAG
TCGGACGTGCCGAGCAAGGACAGAGAGGTGACTCACGATCAGCTGAAACAGTGGTGTGAC
GATAACAAAATATCGACGTATATAGAGACTTCAGCTAAAAACGATAATAATGTCGTCGAA
GCATTCTCAATGGCGGTCCAGAGGTGGGTAGATCTGGACCAAAGAGCCGAGAAAGAGCTG
GGAATGTTCCAGCACCCTGATGCGGTGACACTGCACGGCAACGGAACCGTGTCCGGTTTC
CGGGCGACGTGTTGTTCCCGGATCACTGACGTGTGATCGTGTTGACAGCTGTCACCTGTC
AGAAGTGTCGTTCGGGAACATAGGCTTAGATGACGTCAGTAAGCGATTTGACATTGACAT
TGAAACTTACAACAGAGTAGAGTATTTTTAGAATGCCTTTAGTTAGTAAAACACAGTTTT
CTTGTATAACGTGCGCTTACTGTGGAAAAAGAAAAAAAAAGCACAAAAGCTTCAGTGTTT
TACCGTAAAGCTTGAAACGTCGTGACATCTCATACTTCATTCAACGATTTGTATTAGTCG
AAAGAAATGCGATCTATCATTCCTAAATTTACCATAGAAACCAATGATTTCCAACTATAA
TGCCTAAAGTAGTAAATTAATTTAAAAAATACATTAATAATTGTTGTTATAATACAATAT
GTTAAAAATGATTCAGACATTATCGTTTTGGAGTTTTATAAATCCGGAATTCCCCTCCGG
TATTTCCCCGGCC
(1393 bp)

- SilkBase 1999-2023 -