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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22581_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		retinoblastoma-like_protein_2_[Bombyx_mori]
Ontology
GO:0000075 P cell cycle checkpoint signaling
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000083 P regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005819 C spindle
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006469 P negative regulation of protein kinase activity
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007265 P Ras protein signal transduction
GO:0007346 P regulation of mitotic cell cycle
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016032 P viral process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0019899 F enzyme binding
GO:0019900 F kinase binding
GO:0030182 P neuron differentiation
GO:0030521 P androgen receptor signaling pathway
GO:0031134 P sister chromatid biorientation
GO:0031175 P neuron projection development
GO:0031625 F ubiquitin protein ligase binding
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0034349 P glial cell apoptotic process
GO:0035189 C Rb-E2F complex
GO:0035914 P skeletal muscle cell differentiation
GO:0042551 P neuron maturation
GO:0042802 F identical protein binding
GO:0043353 P enucleate erythrocyte differentiation
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043550 P regulation of lipid kinase activity
GO:0045445 P myoblast differentiation
GO:0045651 P positive regulation of macrophage differentiation
GO:0045786 P negative regulation of cell cycle
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045930 P negative regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048565 P digestive tract development
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050681 F androgen receptor binding
GO:0051146 P striated muscle cell differentiation
GO:0051219 F phosphoprotein binding
GO:0051301 P cell division
GO:0051402 P neuron apoptotic process
GO:0051726 P regulation of cell cycle
GO:0071459 P protein localization to chromosome, centromeric region
GO:0071466 P cellular response to xenobiotic stimulus
GO:0071922 P regulation of cohesin loading
GO:0071930 P negative regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0090230 P regulation of centromere complex assembly
GO:0097284 P hepatocyte apoptotic process
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:3.57 TPM:1.59
ORF EntryO_BomaMSG12483_5prime_partial:A_BomaMSG_c22581_g1_i2
Sequence
(Nucleotide)
GAGACAATTTCTATACGCTGTAATATGGTCACATGTTTATATTATAAGGTGTTTGAACAT
ATCATCAAAGAGGAACATAGGAAAAAGCCACAGGTTTCATTGCAGATGCTTCTTTCACAA
GAAACATACCAGCTAACTGTATATGCGTGCTGTACGGAGATTGTCCTACATGCCTATGGA
GTGAATTCATTCAAGTTTCCCAGAGTGCTGCAGATATTCAAGCTGAGCGCGTTTCATTTC
TATAAGATTATTGAACTAGTTGTACAGGCCGTGGTTGATAAGCTTAGCCGAGACGTCATC
AAACATTTGAATGCAGTCGAAGAAGAAGTACTAGAGTCTCTGGTGTGGACTTCTGACAGT
CCTCTGTGGGACCAACTCAGTAAAACGCCAGTGCCAGCCTCTGCCGACGTCTCCGTACAA
GATTCACCTTTTCGAAGAACTAATGGTCTACAATCACCTGTCTCTACAATAGACCGCTTC
ATGTCACCTATGGCTGAACAAGCAAAGAAGCAATTATTCAAAGACCCTATTAAACCTGGC
CAGTCACTTTTAGTACAAGCGAACACAACACCAGTGAAAGAGCCAGCGGTATCTGCTAAT
ACATCACAACCATCACAAAGCACTTCGAGTTGTGAGACCACGCCTACATCGACACCCAAA
AAAAACAATTCATTAATATTGTTTTTTAGGAAGTTTTATAGTTTAGCGGTAGTGCGTATG
AACGATCTGTGCACGAGATTGCGACTGACTGACGACGAATTAAAACATAAAATTTGGACT
TGTCTTGAGTACTCAATAATGCATCAAACACATCTAATGAAAGACAGACATCTAGATCAG
ATACTTATGTGCTCTGTTTATGTTATATGTAAGGTTTCAAATAATCCGTCTAGTAATCAA
GTGGAGAAAACATTTGCAGAAATCATGCGATGTTACAGACAACGCCCTTTAGCTGATAAT
CATGTTTATAGATCTGTTTTAATCAAACAAAGCACAGACGAGAGTTCACCAGAAAGAGGA
GATTTGATTAACTTTTATAATAAAGTTTATGTGCAATGTATGCAGAATTTTGCACTTAGA
TTTTCTGGACGACACAGGGATGAGTGCAGCCTGTCTCCGCTGCCGACGGGGCGGTGCGAG
GCGCGCTCCCCGGCCGGCACGCGCGTGTCCGAGCGACATCAGCTCTACGTTAAGCCGCTC
ACCGACCCGCCGCCGCAACACCACCACCTCACCTACAGATTCAGCCGCAGCCCCGCCAAG
GACCTACAGGCGATCAATAGTTTGGTCTGGTGCGACACAGGACTGGGGTCGGGCGTAGGC
CTGAAGCGTGCGCTGGAAGGAGCGTTGGACAGCGACCCGAACAAGCGAAACAGAGCCGCA
CCCGCCGTAGCCAGAAAGCTGCATCATCTACTATCTGACAGGCAGGCTGTCTAGAGGTTT
TTTCGAGTTCGTCCAAATGCAGCAAAAATACGAGTCTATAATGAATTTATGTTTTTAGTC
ATTTTCATTTAGTACCAAATATTTGCTTTTAGCTCTCTAGCCGTGACTATCAATGGAAAA
TCTGTTTTTGGCGATATATCACTTGTATGTATTAACAGAAGTCACAATAATCAGATGTTT
AATTATAAATCAATACTGGCTTTATATGTATAACAATATAATACATTGGCATTGTACTCG
AGATTCCAGGCTGGCAAAACATAGCATTTTGATCTCATTTCTTATTTATGTTGAATGTAT
AGTATCGATATGCCATCGTGGAAAAGTTGCTCATTTCTTACGTAAGATTTAAGTTGAATT
TCCATAGGCTGTGTCAGTATGAATTGTTGTTTGTGGG
(1837 bp)

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