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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22466_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		THO_complex_subunit_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0046784 P viral mRNA export from host cell nucleus
GO:0048666 P neuron development
GO:0048699 P generation of neurons
GO:0051028 P mRNA transport
Transcript
Level		FPKM:7.07 TPM:3.16
ORF EntryO_BomaMSG12244_5prime_partial:A_BomaMSG_c22466_g1_i2
Sequence
(Nucleotide)
CACGTAGATGCAGATGTCGCATTCTTTTTGCATCGTCCAGTTATAAACCAAAAGATATCC
GCCAAGTTGGAATCTTTACGTAAAGCATCGGACAGCAAATCGGATTCAATAGAGAAGATT
ATAGAAAGATACAATGTGGCATCAAAGGAAGCCTTGGAACCTATTGTATCGTCAATACAA
CCGATGCTGCCTGCGAGGGTTTTAGAAGACATTTCGCCTGAGTTTTACGTTACATTCTGG
TCATTATCCATGTACGATCTTCGAGTACCGGTCGAAAGTTACGAGAGGGAAATAGAACGT
TTAAAAACAGCAGCAGCTAACGTCAGCAAGGATTCGTCTCAAGGAACCAAAGTTAAGAAA
GAACAGGAACGTTTCAATACGCTCATCGAAAAACTACAGGAGGAGCGGCGCCGACAGGCC
GCGCACGTGGCGGCGGTGCGGGCGCGGCTGGCGCGCGAGTGCGAGGACTGGTTCCCGGCG
CGGGCGGTCCGCTCCGCCAAGAACGAGACCGTGACGCGGCTCATGCAGCTGTGCATATTC
CCGCGCTGCGTCTTCACGGCGGCCGACGCGCTCTACTGCGCCGAGTTCGTGCATACTGTG
CACTCTCTTAAGACTCCCAATTTCTCCACTCTTCTGTGTTATGATAGGTTGTTTTGCGAC
ATCACGTACTCGGTGATGTCTTGCACGGAGGCGGAGGCGGCGCGGTACGGCACGTTCCTC
TGCAAGGTGCTGACGACCGCCATGCGCTGGCACGCCGACAAGGACGCCTTCCACCGAGAG
TGCGCGCACTACCCCGGGTTCGTCACCAAGTACCGCGTCTCCAAGCAGTTCACTGAAGCT
AATGACCATGTCGGATATGAAAACTACAGGCACGTG
(876 bp)

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