SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c22452_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		cytosolic_carboxypeptidase-like_protein_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0015631 F tubulin binding
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0035608 P protein deglutamylation
GO:0035611 P protein branching point deglutamylation
GO:0046872 F metal ion binding
GO:0051607 P defense response to virus
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:2.15 TPM:0.96
ORF EntryO_BomaMSG12212_5prime_partial:A_BomaMSG_c22452_g1_i1
Sequence
(Nucleotide)
ATTTAAAAGATCGACAATAAAACAAATCAGCTGTTATCCGTCAATCGATGTCAGATTGTC
AACAAAATTACGTAATTTTGTTTAGAAAAACAGTGTAGCCTAACAGATAGTGTCAAATTT
TTGAAAATATCAATCATGAAAATTCTTATTTATGCTTCAAAAGTCAAATTGTTACAGTGA
ATGTATGCTTAAAGAAGAGAAATTCGTAATGAAGATTGTTGTATAATGTAGACCAACATA
AAATTTCAAACAATGGATCAAAATAACATTATAGAATGTGGAGGATTTTATTTTATACAT
AATTTTGATTCTGGGAATCTGGGACATGTCGAAAGAGTACCGACAGAGCTTATAGCTCCT
GGCATAAATCATAAAACAAATGCACCTGAAACACCAGACTATGAATTTAATATATGGACG
CGTCCAGATTGTGCTGGTACCGAATTTGAGAATGGAAACCGAACCTGGTTCTACTTTGGT
GTTCAAGCAACAGAGCAAAATGTTCTCGTGCGGTTAAACTTGGTAAACTTAAACAAACAA
GGAAAGATGTACAATCAAGGTATGGCTCCAGTTACCAGAACCCTACCAGGCAAACCACAG
TGGGAGAGGATCAGAGATAGACCCGTGCATTCGACCGACGACAACACATTTATGTTAAGT
TTCAAATACAGGACGGCAGATAATTTGAAAGCAACGACATTCTTTGCCTTCACATATCCG
TTCTCTTTTGCCGAACTACAGATAGCTTTGAACTCGATCGACCTAAAAATGCTACCTCTA
CCGCCCCCTCAGTCACCAGACGACATATACTACTATAGAGAATGTCTCATACATTCACTA
GAAGGTAGGCGGGTGGATCTGCTAACTGTATCATCATACCATGGTATATCAACTGACAGG
GAAGAAAAACTGACGAATCTCTTTCCGGAAAACCAAGAGAGGCCATTCAAGTTTCCTAAT
AAAAAGGTAGTGTTCATATCGGCGCGGGTACATCCAGGCGAGACGCCGTCCAGCTTCGTG
TTCAATGGGTTTTTGAACCTGCTCCTCACGAGGAACGATCCGGTCGCGATACAGTTGCGG
AAACTGTACGTCTTCAAGATGATACCGTTTCTGAATCCGGACGGAGTCGCCCGGGGCCAC
TACAGGACCGACACGAGGGGCGTTAATCTCAACAGAGTTTATTTAAATCCATCGCTGAGT
TACCATCCAACGGTCTACGCTTCGAGGGCCTTGATAAGATATTATCACTTTGGTTGTGAA
AAAGAAGACAGTTTCGAGGAGGGCAATCTGTCCATGCGCAGCATCCAAAATGTCAACGAG
ACAAGCGAGCCACTCGAAACGAAAAAGAAGAAAAGCTTGTCCCCTTATAAAATTGGTGAA
TACGGTAAACGAGAGAAATCGAGCAAATCCGTGGGCTGTAACAAGTCTAGCACGAGCATC
AAACAAGCAAACGCGAGTAAAGACAAGAACGCAATCAAGAACACGAACGAGACAGGAC
(1498 bp)

- SilkBase 1999-2023 -